RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
R3HDM2-212ENST00000548161 ABCC9O60706 1549 aa19.4■□□□□ 0.7
R3HDM2-212ENST00000548161 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
R3HDM2-212ENST00000548161 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
R3HDM2-212ENST00000548161 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
R3HDM2-212ENST00000548161 NACADO15069 1562 aa18.25■□□□□ 0.51
R3HDM2-212ENST00000548161 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
R3HDM2-212ENST00000548161 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
R3HDM2-212ENST00000548161 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
R3HDM2-212ENST00000548161 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
R3HDM2-212ENST00000548161 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
R3HDM2-212ENST00000548161 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
R3HDM2-212ENST00000548161 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
R3HDM2-212ENST00000548161 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
R3HDM2-212ENST00000548161 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
R3HDM2-212ENST00000548161 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
R3HDM2-212ENST00000548161 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
R3HDM2-212ENST00000548161 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
R3HDM2-212ENST00000548161 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
R3HDM2-212ENST00000548161 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
R3HDM2-212ENST00000548161 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
R3HDM2-212ENST00000548161 CUX2O14529 1486 aa16.78■□□□□ 0.28
R3HDM2-212ENST00000548161 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
R3HDM2-212ENST00000548161 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
R3HDM2-212ENST00000548161 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
R3HDM2-212ENST00000548161 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
R3HDM2-212ENST00000548161 NESP48681 1621 aa16.63■□□□□ 0.25
R3HDM2-212ENST00000548161 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
R3HDM2-212ENST00000548161 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
R3HDM2-212ENST00000548161 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
R3HDM2-212ENST00000548161 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
R3HDM2-212ENST00000548161 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
R3HDM2-212ENST00000548161 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
R3HDM2-212ENST00000548161 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
R3HDM2-212ENST00000548161 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
R3HDM2-212ENST00000548161 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
R3HDM2-212ENST00000548161 WIZO95785 1651 aa16.27■□□□□ 0.2
R3HDM2-212ENST00000548161 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
R3HDM2-212ENST00000548161 WDR62O43379 1518 aa16.23■□□□□ 0.19
R3HDM2-212ENST00000548161 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
R3HDM2-212ENST00000548161 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
R3HDM2-212ENST00000548161 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
R3HDM2-212ENST00000548161 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
R3HDM2-212ENST00000548161 CFTRP13569 1480 aa16.14■□□□□ 0.17
R3HDM2-212ENST00000548161 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
R3HDM2-212ENST00000548161 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
R3HDM2-212ENST00000548161 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
R3HDM2-212ENST00000548161 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
R3HDM2-212ENST00000548161 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
R3HDM2-212ENST00000548161 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
R3HDM2-212ENST00000548161 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
R3HDM2-212ENST00000548161 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
R3HDM2-212ENST00000548161 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
R3HDM2-212ENST00000548161 RIMBP3CA6NJZ7 1639 aa15.78■□□□□ 0.12
R3HDM2-212ENST00000548161 RIMBP3BA6NNM3 1639 aa15.78■□□□□ 0.12
R3HDM2-212ENST00000548161 RIMBP3Q9UFD9 1639 aa15.78■□□□□ 0.12
R3HDM2-212ENST00000548161 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
R3HDM2-212ENST00000548161 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
R3HDM2-212ENST00000548161 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
R3HDM2-212ENST00000548161 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
R3HDM2-212ENST00000548161 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
R3HDM2-212ENST00000548161 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
R3HDM2-212ENST00000548161 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
R3HDM2-212ENST00000548161 FBLN2P98095 1184 aa15.63■□□□□ 0.09
R3HDM2-212ENST00000548161 CHD1O14646 1710 aa15.63■□□□□ 0.09
R3HDM2-212ENST00000548161 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
R3HDM2-212ENST00000548161 SOGA1O94964 1423 aa15.6■□□□□ 0.09
R3HDM2-212ENST00000548161 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
R3HDM2-212ENST00000548161 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
R3HDM2-212ENST00000548161 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
R3HDM2-212ENST00000548161 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
R3HDM2-212ENST00000548161 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
R3HDM2-212ENST00000548161 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
R3HDM2-212ENST00000548161 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
R3HDM2-212ENST00000548161 CUX1P39880 1505 aa15.51■□□□□ 0.07
R3HDM2-212ENST00000548161 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
R3HDM2-212ENST00000548161 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
R3HDM2-212ENST00000548161 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
R3HDM2-212ENST00000548161 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
R3HDM2-212ENST00000548161 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
R3HDM2-212ENST00000548161 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
R3HDM2-212ENST00000548161 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
R3HDM2-212ENST00000548161 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
R3HDM2-212ENST00000548161 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
R3HDM2-212ENST00000548161 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
R3HDM2-212ENST00000548161 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
R3HDM2-212ENST00000548161 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
R3HDM2-212ENST00000548161 NUP160Q12769 1436 aa15.24■□□□□ 0.03
R3HDM2-212ENST00000548161 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
R3HDM2-212ENST00000548161 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
R3HDM2-212ENST00000548161 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
R3HDM2-212ENST00000548161 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
R3HDM2-212ENST00000548161 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.02
R3HDM2-212ENST00000548161 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
R3HDM2-212ENST00000548161 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
R3HDM2-212ENST00000548161 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
R3HDM2-212ENST00000548161 SHROOM2Q13796 1616 aa15.16■□□□□ 0.02
R3HDM2-212ENST00000548161 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
R3HDM2-212ENST00000548161 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
R3HDM2-212ENST00000548161 KIF13AQ9H1H9 1805 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms