RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
SCN8A-205ENST00000548086 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
SCN8A-205ENST00000548086 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SCN8A-205ENST00000548086 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
SCN8A-205ENST00000548086 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
SCN8A-205ENST00000548086 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
SCN8A-205ENST00000548086 NACADO15069 1562 aa21.09■□□□□ 0.97
SCN8A-205ENST00000548086 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
SCN8A-205ENST00000548086 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
SCN8A-205ENST00000548086 SHROOM4Q9ULL8 1493 aa20.85■□□□□ 0.93
SCN8A-205ENST00000548086 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
SCN8A-205ENST00000548086 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
SCN8A-205ENST00000548086 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCN8A-205ENST00000548086 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
SCN8A-205ENST00000548086 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
SCN8A-205ENST00000548086 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
SCN8A-205ENST00000548086 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
SCN8A-205ENST00000548086 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
SCN8A-205ENST00000548086 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
SCN8A-205ENST00000548086 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
SCN8A-205ENST00000548086 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
SCN8A-205ENST00000548086 WIZO95785 1651 aa19.74■□□□□ 0.75
SCN8A-205ENST00000548086 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
SCN8A-205ENST00000548086 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
SCN8A-205ENST00000548086 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SCN8A-205ENST00000548086 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
SCN8A-205ENST00000548086 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
SCN8A-205ENST00000548086 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
SCN8A-205ENST00000548086 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
SCN8A-205ENST00000548086 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
SCN8A-205ENST00000548086 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
SCN8A-205ENST00000548086 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
SCN8A-205ENST00000548086 NESP48681 1621 aa18.98■□□□□ 0.63
SCN8A-205ENST00000548086 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
SCN8A-205ENST00000548086 CFTRP13569 1480 aa18.96■□□□□ 0.63
SCN8A-205ENST00000548086 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
SCN8A-205ENST00000548086 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
SCN8A-205ENST00000548086 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
SCN8A-205ENST00000548086 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
SCN8A-205ENST00000548086 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
SCN8A-205ENST00000548086 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
SCN8A-205ENST00000548086 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
SCN8A-205ENST00000548086 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
SCN8A-205ENST00000548086 WRNQ14191 1432 aaPredicted RBP eCLIP18.67■□□□□ 0.58
SCN8A-205ENST00000548086 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
SCN8A-205ENST00000548086 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
SCN8A-205ENST00000548086 ERCC6Q03468 1493 aa18.63■□□□□ 0.57
SCN8A-205ENST00000548086 CUX1P39880 1505 aa18.63■□□□□ 0.57
SCN8A-205ENST00000548086 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
SCN8A-205ENST00000548086 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
SCN8A-205ENST00000548086 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
SCN8A-205ENST00000548086 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
SCN8A-205ENST00000548086 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
SCN8A-205ENST00000548086 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
SCN8A-205ENST00000548086 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
SCN8A-205ENST00000548086 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
SCN8A-205ENST00000548086 WDR62O43379 1518 aa18.45■□□□□ 0.54
SCN8A-205ENST00000548086 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
SCN8A-205ENST00000548086 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
SCN8A-205ENST00000548086 SOGA1O94964 1423 aa18.37■□□□□ 0.53
SCN8A-205ENST00000548086 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
SCN8A-205ENST00000548086 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
SCN8A-205ENST00000548086 CUX2O14529 1486 aa18.34■□□□□ 0.53
SCN8A-205ENST00000548086 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
SCN8A-205ENST00000548086 WDR97A6NE52 1622 aa18.27■□□□□ 0.52
SCN8A-205ENST00000548086 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
SCN8A-205ENST00000548086 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
SCN8A-205ENST00000548086 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
SCN8A-205ENST00000548086 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-205ENST00000548086 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
SCN8A-205ENST00000548086 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCN8A-205ENST00000548086 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
SCN8A-205ENST00000548086 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
SCN8A-205ENST00000548086 EEA1Q15075 1411 aa18.16■□□□□ 0.5
SCN8A-205ENST00000548086 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
SCN8A-205ENST00000548086 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
SCN8A-205ENST00000548086 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
SCN8A-205ENST00000548086 IGF1RP08069 1367 aa18.1■□□□□ 0.49
SCN8A-205ENST00000548086 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
SCN8A-205ENST00000548086 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
SCN8A-205ENST00000548086 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
SCN8A-205ENST00000548086 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
SCN8A-205ENST00000548086 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
SCN8A-205ENST00000548086 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
SCN8A-205ENST00000548086 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
SCN8A-205ENST00000548086 KIF21BO75037 1637 aa18■□□□□ 0.47
SCN8A-205ENST00000548086 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
SCN8A-205ENST00000548086 CUL7Q14999 1698 aa17.98■□□□□ 0.47
SCN8A-205ENST00000548086 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
SCN8A-205ENST00000548086 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
SCN8A-205ENST00000548086 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
SCN8A-205ENST00000548086 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
SCN8A-205ENST00000548086 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
SCN8A-205ENST00000548086 FBLN2P98095 1184 aa17.88■□□□□ 0.45
SCN8A-205ENST00000548086 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
SCN8A-205ENST00000548086 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-205ENST00000548086 GRIN2AQ12879 1464 aa17.83■□□□□ 0.45
SCN8A-205ENST00000548086 CHD1O14646 1710 aa17.82■□□□□ 0.44
SCN8A-205ENST00000548086 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
SCN8A-205ENST00000548086 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms