RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
KRT18-204ENST00000548015 ABCC9O60706 1549 aa24.64■■□□□ 1.53
KRT18-204ENST00000548015 CCDC180Q9P1Z9 1646 aa24.37■■□□□ 1.49
KRT18-204ENST00000548015 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
KRT18-204ENST00000548015 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
KRT18-204ENST00000548015 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
KRT18-204ENST00000548015 NACADO15069 1562 aa23.2■■□□□ 1.3
KRT18-204ENST00000548015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
KRT18-204ENST00000548015 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
KRT18-204ENST00000548015 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
KRT18-204ENST00000548015 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
KRT18-204ENST00000548015 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
KRT18-204ENST00000548015 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
KRT18-204ENST00000548015 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
KRT18-204ENST00000548015 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
KRT18-204ENST00000548015 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
KRT18-204ENST00000548015 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
KRT18-204ENST00000548015 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
KRT18-204ENST00000548015 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
KRT18-204ENST00000548015 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
KRT18-204ENST00000548015 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
KRT18-204ENST00000548015 DNAJC5Q9H3Z4 198 aa21.36■■□□□ 1.01
KRT18-204ENST00000548015 SMARCA4P51532 1647 aa21.29■■□□□ 1
KRT18-204ENST00000548015 SMARCA2P51531 1590 aa21.28■■□□□ 1
KRT18-204ENST00000548015 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
KRT18-204ENST00000548015 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
KRT18-204ENST00000548015 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
KRT18-204ENST00000548015 CUX2O14529 1486 aa21.19■□□□□ 0.98
KRT18-204ENST00000548015 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
KRT18-204ENST00000548015 NESP48681 1621 aa21.17■□□□□ 0.98
KRT18-204ENST00000548015 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
KRT18-204ENST00000548015 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
KRT18-204ENST00000548015 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
KRT18-204ENST00000548015 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
KRT18-204ENST00000548015 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
KRT18-204ENST00000548015 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
KRT18-204ENST00000548015 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
KRT18-204ENST00000548015 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
KRT18-204ENST00000548015 WIZO95785 1651 aa20.77■□□□□ 0.92
KRT18-204ENST00000548015 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
KRT18-204ENST00000548015 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
KRT18-204ENST00000548015 CFTRP13569 1480 aa20.63■□□□□ 0.89
KRT18-204ENST00000548015 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
KRT18-204ENST00000548015 WDR62O43379 1518 aa20.59■□□□□ 0.89
KRT18-204ENST00000548015 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
KRT18-204ENST00000548015 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
KRT18-204ENST00000548015 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
KRT18-204ENST00000548015 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
KRT18-204ENST00000548015 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
KRT18-204ENST00000548015 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
KRT18-204ENST00000548015 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
KRT18-204ENST00000548015 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
KRT18-204ENST00000548015 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
KRT18-204ENST00000548015 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
KRT18-204ENST00000548015 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.83e-7■■■■□ 20.1
KRT18-204ENST00000548015 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
KRT18-204ENST00000548015 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
KRT18-204ENST00000548015 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
KRT18-204ENST00000548015 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
KRT18-204ENST00000548015 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
KRT18-204ENST00000548015 SOGA1O94964 1423 aa19.97■□□□□ 0.79
KRT18-204ENST00000548015 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
KRT18-204ENST00000548015 FBLN2P98095 1184 aa19.94■□□□□ 0.78
KRT18-204ENST00000548015 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
KRT18-204ENST00000548015 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
KRT18-204ENST00000548015 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
KRT18-204ENST00000548015 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
KRT18-204ENST00000548015 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
KRT18-204ENST00000548015 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
KRT18-204ENST00000548015 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
KRT18-204ENST00000548015 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
KRT18-204ENST00000548015 CUX1P39880 1505 aa19.86■□□□□ 0.77
KRT18-204ENST00000548015 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
KRT18-204ENST00000548015 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
KRT18-204ENST00000548015 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
KRT18-204ENST00000548015 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
KRT18-204ENST00000548015 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
KRT18-204ENST00000548015 CHD1O14646 1710 aa19.68■□□□□ 0.74
KRT18-204ENST00000548015 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
KRT18-204ENST00000548015 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
KRT18-204ENST00000548015 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
KRT18-204ENST00000548015 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
KRT18-204ENST00000548015 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
KRT18-204ENST00000548015 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
KRT18-204ENST00000548015 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
KRT18-204ENST00000548015 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
KRT18-204ENST00000548015 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
KRT18-204ENST00000548015 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
KRT18-204ENST00000548015 NUP160Q12769 1436 aa19.46■□□□□ 0.71
KRT18-204ENST00000548015 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
KRT18-204ENST00000548015 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
KRT18-204ENST00000548015 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
KRT18-204ENST00000548015 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
KRT18-204ENST00000548015 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
KRT18-204ENST00000548015 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
KRT18-204ENST00000548015 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
KRT18-204ENST00000548015 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
KRT18-204ENST00000548015 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
KRT18-204ENST00000548015 IGF1RP08069 1367 aa19.3■□□□□ 0.68
KRT18-204ENST00000548015 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms