RNA–Protein interactions for RNA: ENST00000547983.5

PXN-214, Transcript of paxillin, humanhuman

TSL 5

Gene PXN, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-214ENST00000547983 NISCHQ9Y2I1 1504 aa45.71■■■■■ 4.91
PXN-214ENST00000547983 ABCC9O60706 1549 aa41.61■■■■■ 4.25
PXN-214ENST00000547983 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
PXN-214ENST00000547983 DNAJC5BQ9UF47 199 aa39.51■■■■□ 3.92
PXN-214ENST00000547983 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
PXN-214ENST00000547983 NACADO15069 1562 aa38.94■■■■□ 3.82
PXN-214ENST00000547983 DCAF8L2P0C7V8 631 aa38.92■■■■□ 3.82
PXN-214ENST00000547983 PABPN1Q86U42 306 aaKnown RBP eCLIP38.78■■■■□ 3.8
PXN-214ENST00000547983 UNC13AQ9UPW8 1703 aa38.53■■■■□ 3.76
PXN-214ENST00000547983 BICRAQ9NZM4 1560 aa38.28■■■■□ 3.72
PXN-214ENST00000547983 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
PXN-214ENST00000547983 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
PXN-214ENST00000547983 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
PXN-214ENST00000547983 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
PXN-214ENST00000547983 CC2D2AQ9P2K1 1620 aa37.52■■■■□ 3.6
PXN-214ENST00000547983 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
PXN-214ENST00000547983 CECR2Q9BXF3 1484 aa37.46■■■■□ 3.59
PXN-214ENST00000547983 EIF4G1Q04637 1599 aaKnown RBP37.32■■■■□ 3.56
PXN-214ENST00000547983 DNAJC5Q9H3Z4 198 aa36.41■■■■□ 3.42
PXN-214ENST00000547983 NCAPD3P42695 1498 aa36■■■■□ 3.35
PXN-214ENST00000547983 ERCC6Q03468 1493 aa35.87■■■■□ 3.33
PXN-214ENST00000547983 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
PXN-214ENST00000547983 CUX2O14529 1486 aa35.86■■■■□ 3.33
PXN-214ENST00000547983 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
PXN-214ENST00000547983 NESP48681 1621 aa35.68■■■■□ 3.3
PXN-214ENST00000547983 SMARCA2P51531 1590 aa35.67■■■■□ 3.3
PXN-214ENST00000547983 HMGXB3Q12766 1538 aa35.64■■■■□ 3.3
PXN-214ENST00000547983 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
PXN-214ENST00000547983 BAZ1AQ9NRL2 1556 aaPredicted RBP35.44■■■■□ 3.26
PXN-214ENST00000547983 PEG3Q9GZU2 1588 aa35.32■■■■□ 3.24
PXN-214ENST00000547983 MROH2BQ7Z745 1585 aa35.29■■■■□ 3.24
PXN-214ENST00000547983 THOC2Q8NI27 1593 aaKnown RBP35.27■■■■□ 3.24
PXN-214ENST00000547983 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
PXN-214ENST00000547983 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
PXN-214ENST00000547983 PDS5BQ9NTI5 1447 aa35.04■■■■□ 3.2
PXN-214ENST00000547983 CADPSQ9ULU8 1353 aa34.92■■■■□ 3.18
PXN-214ENST00000547983 WIZO95785 1651 aa34.86■■■■□ 3.17
PXN-214ENST00000547983 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
PXN-214ENST00000547983 TRIM41Q8WV44 630 aa34.73■■■■□ 3.15
PXN-214ENST00000547983 WDR62O43379 1518 aa34.68■■■■□ 3.14
PXN-214ENST00000547983 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
PXN-214ENST00000547983 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
PXN-214ENST00000547983 CFTRP13569 1480 aa34.42■■■■□ 3.1
PXN-214ENST00000547983 RSF1Q96T23 1441 aaPredicted RBP34.4■■■■□ 3.1
PXN-214ENST00000547983 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
PXN-214ENST00000547983 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
PXN-214ENST00000547983 TOP2AP11388 1531 aaKnown RBP34.28■■■■□ 3.08
PXN-214ENST00000547983 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
PXN-214ENST00000547983 PRDM2Q13029 1718 aa33.99■■■■□ 3.03
PXN-214ENST00000547983 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
PXN-214ENST00000547983 IFT140Q96RY7 1462 aa33.87■■■■□ 3.01
PXN-214ENST00000547983 RIMBP3CA6NJZ7 1639 aa33.86■■■■□ 3.01
PXN-214ENST00000547983 RIMBP3BA6NNM3 1639 aa33.86■■■■□ 3.01
PXN-214ENST00000547983 RIMBP3Q9UFD9 1639 aa33.86■■■■□ 3.01
PXN-214ENST00000547983 TOPBP1Q92547 1522 aa33.84■■■■□ 3.01
PXN-214ENST00000547983 ARHGEF11O15085 1522 aa33.69■■■□□ 2.98
PXN-214ENST00000547983 EIF4G3O43432 1585 aaKnown RBP33.67■■■□□ 2.98
PXN-214ENST00000547983 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.973e-6■■■□□ 18.5
PXN-214ENST00000547983 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
PXN-214ENST00000547983 DNMBPQ6XZF7 1577 aa33.63■■■□□ 2.97
PXN-214ENST00000547983 CYB5RLQ6IPT4 315 aa33.58■■■□□ 2.97
PXN-214ENST00000547983 TARBP1Q13395 1621 aaKnown RBP33.57■■■□□ 2.96
PXN-214ENST00000547983 CHD1O14646 1710 aa33.53■■■□□ 2.96
PXN-214ENST00000547983 FBLN2P98095 1184 aa33.5■■■□□ 2.95
PXN-214ENST00000547983 POLA1P09884 1462 aaPredicted RBP33.46■■■□□ 2.95
PXN-214ENST00000547983 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
PXN-214ENST00000547983 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
PXN-214ENST00000547983 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
PXN-214ENST00000547983 SOGA1O94964 1423 aa33.34■■■□□ 2.93
PXN-214ENST00000547983 TRHP20396 242 aaPredicted RBP33.31■■■□□ 2.92
PXN-214ENST00000547983 SNAPC4Q5SXM2 1469 aa33.21■■■□□ 2.91
PXN-214ENST00000547983 FGD5Q6ZNL6 1462 aa33.21■■■□□ 2.91
PXN-214ENST00000547983 CUX1P39880 1505 aa33.15■■■□□ 2.9
PXN-214ENST00000547983 CHMP7Q8WUX9 453 aaPredicted RBP33.13■■■□□ 2.89
PXN-214ENST00000547983 CLASP1Q7Z460 1538 aa33.1■■■□□ 2.89
PXN-214ENST00000547983 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
PXN-214ENST00000547983 GRIN2BQ13224 1484 aa33.02■■■□□ 2.88
PXN-214ENST00000547983 MAGI1Q96QZ7 1491 aaPredicted RBP33.02■■■□□ 2.88
PXN-214ENST00000547983 SYNJ1O43426 1573 aa33■■■□□ 2.87
PXN-214ENST00000547983 SYNJ2O15056 1496 aa32.95■■■□□ 2.87
PXN-214ENST00000547983 GAPVD1Q14C86 1478 aa32.89■■■□□ 2.86
PXN-214ENST00000547983 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
PXN-214ENST00000547983 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
PXN-214ENST00000547983 ABCA5Q8WWZ7 1642 aa32.75■■■□□ 2.83
PXN-214ENST00000547983 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
PXN-214ENST00000547983 ERCC6L2Q5T890 1561 aa32.68■■■□□ 2.82
PXN-214ENST00000547983 GRIN2AQ12879 1464 aa32.61■■■□□ 2.81
PXN-214ENST00000547983 WRNQ14191 1432 aaPredicted RBP eCLIP32.58■■■□□ 2.81
PXN-214ENST00000547983 CEP170Q5SW79 1584 aa32.56■■■□□ 2.8
PXN-214ENST00000547983 AEBP2Q6ZN18 517 aaPredicted RBP32.55■■■□□ 2.8
PXN-214ENST00000547983 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
PXN-214ENST00000547983 NUP160Q12769 1436 aa32.51■■■□□ 2.79
PXN-214ENST00000547983 TOP2BQ02880 1626 aa32.45■■■□□ 2.79
PXN-214ENST00000547983 BIVM-ERCC5R4GMW8 1640 aa32.45■■■□□ 2.79
PXN-214ENST00000547983 FHAD1B1AJZ9 1412 aa32.43■■■□□ 2.78
PXN-214ENST00000547983 SHROOM2Q13796 1616 aa32.4■■■□□ 2.78
PXN-214ENST00000547983 ERICH3Q5RHP9 1530 aa32.32■■■□□ 2.76
PXN-214ENST00000547983 PRG4Q92954 1404 aaPredicted RBP32.28■■■□□ 2.76
PXN-214ENST00000547983 JPH4Q96JJ6 628 aa32.27■■■□□ 2.76
PXN-214ENST00000547983 KIF13AQ9H1H9 1805 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms