RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.68
TUBA1A-204ENST00000547939 ABCC9O60706 1549 aa23.85■■□□□ 1.41
TUBA1A-204ENST00000547939 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
TUBA1A-204ENST00000547939 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
TUBA1A-204ENST00000547939 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
TUBA1A-204ENST00000547939 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.13
TUBA1A-204ENST00000547939 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
TUBA1A-204ENST00000547939 NACADO15069 1562 aa21.99■■□□□ 1.11
TUBA1A-204ENST00000547939 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
TUBA1A-204ENST00000547939 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
TUBA1A-204ENST00000547939 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
TUBA1A-204ENST00000547939 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
TUBA1A-204ENST00000547939 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
TUBA1A-204ENST00000547939 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
TUBA1A-204ENST00000547939 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
TUBA1A-204ENST00000547939 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
TUBA1A-204ENST00000547939 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
TUBA1A-204ENST00000547939 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
TUBA1A-204ENST00000547939 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
TUBA1A-204ENST00000547939 CUX2O14529 1486 aa20.87■□□□□ 0.93
TUBA1A-204ENST00000547939 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
TUBA1A-204ENST00000547939 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
TUBA1A-204ENST00000547939 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
TUBA1A-204ENST00000547939 NESP48681 1621 aa20.34■□□□□ 0.85
TUBA1A-204ENST00000547939 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
TUBA1A-204ENST00000547939 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
TUBA1A-204ENST00000547939 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
TUBA1A-204ENST00000547939 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
TUBA1A-204ENST00000547939 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
TUBA1A-204ENST00000547939 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
TUBA1A-204ENST00000547939 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
TUBA1A-204ENST00000547939 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
TUBA1A-204ENST00000547939 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
TUBA1A-204ENST00000547939 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
TUBA1A-204ENST00000547939 WDR62O43379 1518 aa19.81■□□□□ 0.76
TUBA1A-204ENST00000547939 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
TUBA1A-204ENST00000547939 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
TUBA1A-204ENST00000547939 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
TUBA1A-204ENST00000547939 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
TUBA1A-204ENST00000547939 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
TUBA1A-204ENST00000547939 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
TUBA1A-204ENST00000547939 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
TUBA1A-204ENST00000547939 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
TUBA1A-204ENST00000547939 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
TUBA1A-204ENST00000547939 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
TUBA1A-204ENST00000547939 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
TUBA1A-204ENST00000547939 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
TUBA1A-204ENST00000547939 WIZO95785 1651 aa19.4■□□□□ 0.7
TUBA1A-204ENST00000547939 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
TUBA1A-204ENST00000547939 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
TUBA1A-204ENST00000547939 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
TUBA1A-204ENST00000547939 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
TUBA1A-204ENST00000547939 CFTRP13569 1480 aa19.27■□□□□ 0.67
TUBA1A-204ENST00000547939 CHD1O14646 1710 aa19.25■□□□□ 0.67
TUBA1A-204ENST00000547939 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
TUBA1A-204ENST00000547939 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
TUBA1A-204ENST00000547939 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
TUBA1A-204ENST00000547939 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
TUBA1A-204ENST00000547939 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
TUBA1A-204ENST00000547939 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
TUBA1A-204ENST00000547939 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
TUBA1A-204ENST00000547939 TOPBP1Q92547 1522 aa19■□□□□ 0.63
TUBA1A-204ENST00000547939 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
TUBA1A-204ENST00000547939 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
TUBA1A-204ENST00000547939 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
TUBA1A-204ENST00000547939 DNMBPQ6XZF7 1577 aa18.86■□□□□ 0.61
TUBA1A-204ENST00000547939 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
TUBA1A-204ENST00000547939 FBLN2P98095 1184 aa18.79■□□□□ 0.6
TUBA1A-204ENST00000547939 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
TUBA1A-204ENST00000547939 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
TUBA1A-204ENST00000547939 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
TUBA1A-204ENST00000547939 KIF13AQ9H1H9 1805 aa18.73■□□□□ 0.59
TUBA1A-204ENST00000547939 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
TUBA1A-204ENST00000547939 ILDR1Q86SU0 546 aaPredicted RBP18.7■□□□□ 0.58
TUBA1A-204ENST00000547939 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
TUBA1A-204ENST00000547939 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
TUBA1A-204ENST00000547939 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
TUBA1A-204ENST00000547939 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
TUBA1A-204ENST00000547939 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
TUBA1A-204ENST00000547939 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
TUBA1A-204ENST00000547939 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
TUBA1A-204ENST00000547939 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
TUBA1A-204ENST00000547939 SOGA1O94964 1423 aa18.56■□□□□ 0.56
TUBA1A-204ENST00000547939 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
TUBA1A-204ENST00000547939 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
TUBA1A-204ENST00000547939 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
TUBA1A-204ENST00000547939 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
TUBA1A-204ENST00000547939 CUX1P39880 1505 aa18.48■□□□□ 0.55
TUBA1A-204ENST00000547939 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
TUBA1A-204ENST00000547939 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
TUBA1A-204ENST00000547939 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
TUBA1A-204ENST00000547939 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
TUBA1A-204ENST00000547939 DIP2BQ9P265 1576 aa18.32■□□□□ 0.52
TUBA1A-204ENST00000547939 GRIN2AQ12879 1464 aa18.32■□□□□ 0.52
TUBA1A-204ENST00000547939 NUP160Q12769 1436 aa18.32■□□□□ 0.52
TUBA1A-204ENST00000547939 KDM6BO15054 1643 aa18.31■□□□□ 0.52
TUBA1A-204ENST00000547939 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
TUBA1A-204ENST00000547939 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
TUBA1A-204ENST00000547939 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
TUBA1A-204ENST00000547939 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms