RNA–Protein interactions for RNA: ENST00000547918.2

TRBV7-1-201, Transcript of T cell receptor beta variable 7-1 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV7-1, Length 380 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1-201ENST00000547918 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
TRBV7-1-201ENST00000547918 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
TRBV7-1-201ENST00000547918 ABCC9O60706 1549 aa20.54■□□□□ 0.88
TRBV7-1-201ENST00000547918 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
TRBV7-1-201ENST00000547918 NACADO15069 1562 aa19.67■□□□□ 0.74
TRBV7-1-201ENST00000547918 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
TRBV7-1-201ENST00000547918 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
TRBV7-1-201ENST00000547918 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
TRBV7-1-201ENST00000547918 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
TRBV7-1-201ENST00000547918 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
TRBV7-1-201ENST00000547918 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
TRBV7-1-201ENST00000547918 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
TRBV7-1-201ENST00000547918 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
TRBV7-1-201ENST00000547918 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
TRBV7-1-201ENST00000547918 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
TRBV7-1-201ENST00000547918 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
TRBV7-1-201ENST00000547918 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
TRBV7-1-201ENST00000547918 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
TRBV7-1-201ENST00000547918 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
TRBV7-1-201ENST00000547918 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
TRBV7-1-201ENST00000547918 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
TRBV7-1-201ENST00000547918 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
TRBV7-1-201ENST00000547918 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
TRBV7-1-201ENST00000547918 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
TRBV7-1-201ENST00000547918 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
TRBV7-1-201ENST00000547918 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
TRBV7-1-201ENST00000547918 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
TRBV7-1-201ENST00000547918 WIZO95785 1651 aa17.87■□□□□ 0.45
TRBV7-1-201ENST00000547918 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
TRBV7-1-201ENST00000547918 NESP48681 1621 aa17.75■□□□□ 0.43
TRBV7-1-201ENST00000547918 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
TRBV7-1-201ENST00000547918 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
TRBV7-1-201ENST00000547918 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
TRBV7-1-201ENST00000547918 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
TRBV7-1-201ENST00000547918 CUX2O14529 1486 aa17.58■□□□□ 0.41
TRBV7-1-201ENST00000547918 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
TRBV7-1-201ENST00000547918 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
TRBV7-1-201ENST00000547918 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
TRBV7-1-201ENST00000547918 CFTRP13569 1480 aa17.48■□□□□ 0.39
TRBV7-1-201ENST00000547918 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
TRBV7-1-201ENST00000547918 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
TRBV7-1-201ENST00000547918 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
TRBV7-1-201ENST00000547918 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
TRBV7-1-201ENST00000547918 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
TRBV7-1-201ENST00000547918 WDR62O43379 1518 aa17.37■□□□□ 0.37
TRBV7-1-201ENST00000547918 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TRBV7-1-201ENST00000547918 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
TRBV7-1-201ENST00000547918 DNAJC5Q9H3Z4 198 aa17.16■□□□□ 0.34
TRBV7-1-201ENST00000547918 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
TRBV7-1-201ENST00000547918 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
TRBV7-1-201ENST00000547918 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
TRBV7-1-201ENST00000547918 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
TRBV7-1-201ENST00000547918 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
TRBV7-1-201ENST00000547918 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
TRBV7-1-201ENST00000547918 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.3
TRBV7-1-201ENST00000547918 CUX1P39880 1505 aa16.94■□□□□ 0.3
TRBV7-1-201ENST00000547918 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
TRBV7-1-201ENST00000547918 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
TRBV7-1-201ENST00000547918 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
TRBV7-1-201ENST00000547918 SOGA1O94964 1423 aa16.87■□□□□ 0.29
TRBV7-1-201ENST00000547918 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRBV7-1-201ENST00000547918 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
TRBV7-1-201ENST00000547918 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
TRBV7-1-201ENST00000547918 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
TRBV7-1-201ENST00000547918 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
TRBV7-1-201ENST00000547918 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
TRBV7-1-201ENST00000547918 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
TRBV7-1-201ENST00000547918 SYNJ1O43426 1573 aa16.77■□□□□ 0.27
TRBV7-1-201ENST00000547918 CHD1O14646 1710 aa16.75■□□□□ 0.27
TRBV7-1-201ENST00000547918 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
TRBV7-1-201ENST00000547918 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
TRBV7-1-201ENST00000547918 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
TRBV7-1-201ENST00000547918 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
TRBV7-1-201ENST00000547918 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
TRBV7-1-201ENST00000547918 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
TRBV7-1-201ENST00000547918 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
TRBV7-1-201ENST00000547918 FBLN2P98095 1184 aa16.63■□□□□ 0.25
TRBV7-1-201ENST00000547918 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
TRBV7-1-201ENST00000547918 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
TRBV7-1-201ENST00000547918 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
TRBV7-1-201ENST00000547918 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
TRBV7-1-201ENST00000547918 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
TRBV7-1-201ENST00000547918 ARHGEF11O15085 1522 aa16.57■□□□□ 0.24
TRBV7-1-201ENST00000547918 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
TRBV7-1-201ENST00000547918 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
TRBV7-1-201ENST00000547918 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
TRBV7-1-201ENST00000547918 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
TRBV7-1-201ENST00000547918 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
TRBV7-1-201ENST00000547918 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
TRBV7-1-201ENST00000547918 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
TRBV7-1-201ENST00000547918 NUP160Q12769 1436 aa16.43■□□□□ 0.22
TRBV7-1-201ENST00000547918 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
TRBV7-1-201ENST00000547918 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
TRBV7-1-201ENST00000547918 CUL7Q14999 1698 aa16.38■□□□□ 0.21
TRBV7-1-201ENST00000547918 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
TRBV7-1-201ENST00000547918 IGF1RP08069 1367 aa16.36■□□□□ 0.21
TRBV7-1-201ENST00000547918 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
TRBV7-1-201ENST00000547918 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
TRBV7-1-201ENST00000547918 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
TRBV7-1-201ENST00000547918 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms