RNA–Protein interactions for RNA: ENST00000547903.1

PACS2-206, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-206ENST00000547903 NISCHQ9Y2I1 1504 aa43.33■■■■■ 4.53
PACS2-206ENST00000547903 CCDC180Q9P1Z9 1646 aa38.57■■■■□ 3.77
PACS2-206ENST00000547903 ABCC9O60706 1549 aa37.81■■■■□ 3.64
PACS2-206ENST00000547903 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
PACS2-206ENST00000547903 NACADO15069 1562 aa36.29■■■■□ 3.4
PACS2-206ENST00000547903 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
PACS2-206ENST00000547903 ZCCHC6Q5VYS8 1495 aaKnown RBP36.09■■■■□ 3.37
PACS2-206ENST00000547903 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
PACS2-206ENST00000547903 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
PACS2-206ENST00000547903 UNC13AQ9UPW8 1703 aa35.47■■■■□ 3.27
PACS2-206ENST00000547903 PABPN1Q86U42 306 aaKnown RBP eCLIP35.31■■■■□ 3.24
PACS2-206ENST00000547903 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
PACS2-206ENST00000547903 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
PACS2-206ENST00000547903 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
PACS2-206ENST00000547903 DNAJC5BQ9UF47 199 aa34.72■■■■□ 3.15
PACS2-206ENST00000547903 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.09
PACS2-206ENST00000547903 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
PACS2-206ENST00000547903 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
PACS2-206ENST00000547903 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
PACS2-206ENST00000547903 BAZ1AQ9NRL2 1556 aaPredicted RBP33.61■■■□□ 2.97
PACS2-206ENST00000547903 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
PACS2-206ENST00000547903 ATAD2BQ9ULI0 1458 aa33.48■■■□□ 2.95
PACS2-206ENST00000547903 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
PACS2-206ENST00000547903 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
PACS2-206ENST00000547903 HMGXB3Q12766 1538 aa33.32■■■□□ 2.92
PACS2-206ENST00000547903 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
PACS2-206ENST00000547903 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
PACS2-206ENST00000547903 WIZO95785 1651 aa33.02■■■□□ 2.88
PACS2-206ENST00000547903 RSF1Q96T23 1441 aaPredicted RBP32.98■■■□□ 2.87
PACS2-206ENST00000547903 TOP2AP11388 1531 aaKnown RBP32.69■■■□□ 2.82
PACS2-206ENST00000547903 NESP48681 1621 aa32.68■■■□□ 2.82
PACS2-206ENST00000547903 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
PACS2-206ENST00000547903 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
PACS2-206ENST00000547903 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
PACS2-206ENST00000547903 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
PACS2-206ENST00000547903 CUX2O14529 1486 aa32.31■■■□□ 2.76
PACS2-206ENST00000547903 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
PACS2-206ENST00000547903 CFTRP13569 1480 aa32.29■■■□□ 2.76
PACS2-206ENST00000547903 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
PACS2-206ENST00000547903 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
PACS2-206ENST00000547903 FANCD2Q9BXW9 1451 aa32.14■■■□□ 2.74
PACS2-206ENST00000547903 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
PACS2-206ENST00000547903 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
PACS2-206ENST00000547903 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
PACS2-206ENST00000547903 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
PACS2-206ENST00000547903 WDR62O43379 1518 aa31.97■■■□□ 2.71
PACS2-206ENST00000547903 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
PACS2-206ENST00000547903 ABCC8Q09428 1581 aa31.63■■■□□ 2.65
PACS2-206ENST00000547903 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
PACS2-206ENST00000547903 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.64
PACS2-206ENST00000547903 IFT140Q96RY7 1462 aa31.45■■■□□ 2.62
PACS2-206ENST00000547903 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
PACS2-206ENST00000547903 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
PACS2-206ENST00000547903 CUX1P39880 1505 aa31.33■■■□□ 2.61
PACS2-206ENST00000547903 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
PACS2-206ENST00000547903 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
PACS2-206ENST00000547903 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
PACS2-206ENST00000547903 SOGA1O94964 1423 aa31.21■■■□□ 2.59
PACS2-206ENST00000547903 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
PACS2-206ENST00000547903 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
PACS2-206ENST00000547903 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
PACS2-206ENST00000547903 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
PACS2-206ENST00000547903 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
PACS2-206ENST00000547903 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
PACS2-206ENST00000547903 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
PACS2-206ENST00000547903 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
PACS2-206ENST00000547903 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
PACS2-206ENST00000547903 OSCARQ8IYS5 282 aa30.95■■■□□ 2.55
PACS2-206ENST00000547903 ABCA10Q8WWZ4 1543 aa30.94■■■□□ 2.54
PACS2-206ENST00000547903 GRIN2BQ13224 1484 aa30.87■■■□□ 2.53
PACS2-206ENST00000547903 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
PACS2-206ENST00000547903 SNAPC4Q5SXM2 1469 aa30.83■■■□□ 2.53
PACS2-206ENST00000547903 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
PACS2-206ENST00000547903 MAGI1Q96QZ7 1491 aaPredicted RBP30.79■■■□□ 2.52
PACS2-206ENST00000547903 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
PACS2-206ENST00000547903 CHD1O14646 1710 aa30.78■■■□□ 2.52
PACS2-206ENST00000547903 FBLN2P98095 1184 aa30.77■■■□□ 2.52
PACS2-206ENST00000547903 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
PACS2-206ENST00000547903 SYNJ2O15056 1496 aa30.68■■■□□ 2.5
PACS2-206ENST00000547903 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
PACS2-206ENST00000547903 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
PACS2-206ENST00000547903 FHAD1B1AJZ9 1412 aa30.5■■■□□ 2.47
PACS2-206ENST00000547903 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
PACS2-206ENST00000547903 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
PACS2-206ENST00000547903 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
PACS2-206ENST00000547903 RIMBP3CA6NJZ7 1639 aa30.44■■■□□ 2.46
PACS2-206ENST00000547903 RIMBP3BA6NNM3 1639 aa30.44■■■□□ 2.46
PACS2-206ENST00000547903 RIMBP3Q9UFD9 1639 aa30.44■■■□□ 2.46
PACS2-206ENST00000547903 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
PACS2-206ENST00000547903 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
PACS2-206ENST00000547903 IGF1RP08069 1367 aa30.33■■■□□ 2.45
PACS2-206ENST00000547903 NUP160Q12769 1436 aa30.32■■■□□ 2.44
PACS2-206ENST00000547903 CEP170Q5SW79 1584 aa30.3■■■□□ 2.44
PACS2-206ENST00000547903 CUL7Q14999 1698 aa30.3■■■□□ 2.44
PACS2-206ENST00000547903 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
PACS2-206ENST00000547903 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
PACS2-206ENST00000547903 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
PACS2-206ENST00000547903 RUSC2Q8N2Y8 1516 aa30.13■■■□□ 2.41
PACS2-206ENST00000547903 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
PACS2-206ENST00000547903 KIAA0586Q9BVV6 1533 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms