RNA–Protein interactions for RNA: ENST00000547860.1

ELK3-203, Transcript of ELK3, ETS transcription factor, humanhuman

TSL 3

Gene ELK3, Length 808 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-203ENST00000547860 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
ELK3-203ENST00000547860 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
ELK3-203ENST00000547860 ABCC9O60706 1549 aa26.31■■□□□ 1.8
ELK3-203ENST00000547860 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
ELK3-203ENST00000547860 NACADO15069 1562 aa25.1■■□□□ 1.61
ELK3-203ENST00000547860 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
ELK3-203ENST00000547860 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.57
ELK3-203ENST00000547860 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
ELK3-203ENST00000547860 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
ELK3-203ENST00000547860 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
ELK3-203ENST00000547860 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
ELK3-203ENST00000547860 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
ELK3-203ENST00000547860 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
ELK3-203ENST00000547860 SHROOM4Q9ULL8 1493 aa24.21■■□□□ 1.47
ELK3-203ENST00000547860 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
ELK3-203ENST00000547860 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
ELK3-203ENST00000547860 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
ELK3-203ENST00000547860 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
ELK3-203ENST00000547860 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
ELK3-203ENST00000547860 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
ELK3-203ENST00000547860 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
ELK3-203ENST00000547860 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
ELK3-203ENST00000547860 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
ELK3-203ENST00000547860 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
ELK3-203ENST00000547860 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
ELK3-203ENST00000547860 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.26
ELK3-203ENST00000547860 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
ELK3-203ENST00000547860 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
ELK3-203ENST00000547860 NESP48681 1621 aa22.67■■□□□ 1.22
ELK3-203ENST00000547860 CUX2O14529 1486 aa22.65■■□□□ 1.22
ELK3-203ENST00000547860 WIZO95785 1651 aa22.6■■□□□ 1.21
ELK3-203ENST00000547860 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
ELK3-203ENST00000547860 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
ELK3-203ENST00000547860 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
ELK3-203ENST00000547860 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
ELK3-203ENST00000547860 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
ELK3-203ENST00000547860 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
ELK3-203ENST00000547860 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
ELK3-203ENST00000547860 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
ELK3-203ENST00000547860 CFTRP13569 1480 aa22.28■■□□□ 1.16
ELK3-203ENST00000547860 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
ELK3-203ENST00000547860 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
ELK3-203ENST00000547860 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
ELK3-203ENST00000547860 WDR62O43379 1518 aa22.19■■□□□ 1.14
ELK3-203ENST00000547860 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
ELK3-203ENST00000547860 PRDM2Q13029 1718 aa22■■□□□ 1.11
ELK3-203ENST00000547860 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
ELK3-203ENST00000547860 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
ELK3-203ENST00000547860 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
ELK3-203ENST00000547860 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
ELK3-203ENST00000547860 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
ELK3-203ENST00000547860 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
ELK3-203ENST00000547860 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
ELK3-203ENST00000547860 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
ELK3-203ENST00000547860 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
ELK3-203ENST00000547860 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
ELK3-203ENST00000547860 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
ELK3-203ENST00000547860 SOGA1O94964 1423 aa21.51■■□□□ 1.03
ELK3-203ENST00000547860 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
ELK3-203ENST00000547860 CUX1P39880 1505 aa21.5■■□□□ 1.03
ELK3-203ENST00000547860 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
ELK3-203ENST00000547860 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
ELK3-203ENST00000547860 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
ELK3-203ENST00000547860 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
ELK3-203ENST00000547860 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
ELK3-203ENST00000547860 CHD1O14646 1710 aa21.32■■□□□ 1
ELK3-203ENST00000547860 GRIN2BQ13224 1484 aa21.3■■□□□ 1
ELK3-203ENST00000547860 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
ELK3-203ENST00000547860 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
ELK3-203ENST00000547860 FBLN2P98095 1184 aa21.29■■□□□ 1
ELK3-203ENST00000547860 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
ELK3-203ENST00000547860 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
ELK3-203ENST00000547860 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
ELK3-203ENST00000547860 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
ELK3-203ENST00000547860 ARHGEF11O15085 1522 aa21.27■■□□□ 1
ELK3-203ENST00000547860 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
ELK3-203ENST00000547860 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
ELK3-203ENST00000547860 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
ELK3-203ENST00000547860 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
ELK3-203ENST00000547860 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
ELK3-203ENST00000547860 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
ELK3-203ENST00000547860 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
ELK3-203ENST00000547860 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
ELK3-203ENST00000547860 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
ELK3-203ENST00000547860 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
ELK3-203ENST00000547860 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
ELK3-203ENST00000547860 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
ELK3-203ENST00000547860 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
ELK3-203ENST00000547860 ADAMTS12P58397 1594 aa21.02■□□□□ 0.95
ELK3-203ENST00000547860 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
ELK3-203ENST00000547860 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
ELK3-203ENST00000547860 NUP160Q12769 1436 aa20.96■□□□□ 0.95
ELK3-203ENST00000547860 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
ELK3-203ENST00000547860 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
ELK3-203ENST00000547860 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
ELK3-203ENST00000547860 IGF1RP08069 1367 aa20.82■□□□□ 0.92
ELK3-203ENST00000547860 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
ELK3-203ENST00000547860 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
ELK3-203ENST00000547860 JPH4Q96JJ6 628 aa20.75■□□□□ 0.91
ELK3-203ENST00000547860 CUL7Q14999 1698 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms