RNA–Protein interactions for RNA: ENST00000547849.5

CNTN1-204, Transcript of contactin 1, humanhuman

TSL 1 (best) BASIC

Gene CNTN1, Length 3,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-204ENST00000547849 NISCHQ9Y2I1 1504 aa14.95□□□□□ -0.02
CNTN1-204ENST00000547849 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
CNTN1-204ENST00000547849 ABCC9O60706 1549 aa13.03□□□□□ -0.32
CNTN1-204ENST00000547849 MYO15BQ96JP2 1530 aa12.64□□□□□ -0.39
CNTN1-204ENST00000547849 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
CNTN1-204ENST00000547849 NACADO15069 1562 aa12.63□□□□□ -0.39
CNTN1-204ENST00000547849 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
CNTN1-204ENST00000547849 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
CNTN1-204ENST00000547849 ZCCHC6Q5VYS8 1495 aaKnown RBP12.48□□□□□ -0.41
CNTN1-204ENST00000547849 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
CNTN1-204ENST00000547849 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
CNTN1-204ENST00000547849 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
CNTN1-204ENST00000547849 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
CNTN1-204ENST00000547849 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
CNTN1-204ENST00000547849 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
CNTN1-204ENST00000547849 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
CNTN1-204ENST00000547849 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
CNTN1-204ENST00000547849 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.52
CNTN1-204ENST00000547849 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
CNTN1-204ENST00000547849 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
CNTN1-204ENST00000547849 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
CNTN1-204ENST00000547849 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
CNTN1-204ENST00000547849 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
CNTN1-204ENST00000547849 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
CNTN1-204ENST00000547849 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
CNTN1-204ENST00000547849 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
CNTN1-204ENST00000547849 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
CNTN1-204ENST00000547849 WIZO95785 1651 aa11.4□□□□□ -0.58
CNTN1-204ENST00000547849 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
CNTN1-204ENST00000547849 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
CNTN1-204ENST00000547849 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
CNTN1-204ENST00000547849 CUX2O14529 1486 aa11.34□□□□□ -0.59
CNTN1-204ENST00000547849 NESP48681 1621 aa11.32□□□□□ -0.6
CNTN1-204ENST00000547849 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
CNTN1-204ENST00000547849 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
CNTN1-204ENST00000547849 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
CNTN1-204ENST00000547849 WDR62O43379 1518 aa11.21□□□□□ -0.61
CNTN1-204ENST00000547849 CFTRP13569 1480 aa11.17□□□□□ -0.62
CNTN1-204ENST00000547849 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
CNTN1-204ENST00000547849 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
CNTN1-204ENST00000547849 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
CNTN1-204ENST00000547849 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
CNTN1-204ENST00000547849 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
CNTN1-204ENST00000547849 URB2Q14146 1524 aaKnown RBP11.05□□□□□ -0.64
CNTN1-204ENST00000547849 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
CNTN1-204ENST00000547849 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
CNTN1-204ENST00000547849 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CNTN1-204ENST00000547849 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.66
CNTN1-204ENST00000547849 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
CNTN1-204ENST00000547849 WDR97A6NE52 1622 aa10.93□□□□□ -0.66
CNTN1-204ENST00000547849 TOPBP1Q92547 1522 aa10.91□□□□□ -0.66
CNTN1-204ENST00000547849 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
CNTN1-204ENST00000547849 ABCC8Q09428 1581 aa10.87□□□□□ -0.67
CNTN1-204ENST00000547849 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
CNTN1-204ENST00000547849 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
CNTN1-204ENST00000547849 CUX1P39880 1505 aa10.81□□□□□ -0.68
CNTN1-204ENST00000547849 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
CNTN1-204ENST00000547849 CHD1O14646 1710 aa10.8□□□□□ -0.68
CNTN1-204ENST00000547849 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
CNTN1-204ENST00000547849 ABCA5Q8WWZ7 1642 aa10.77□□□□□ -0.69
CNTN1-204ENST00000547849 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
CNTN1-204ENST00000547849 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
CNTN1-204ENST00000547849 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
CNTN1-204ENST00000547849 TOP2BQ02880 1626 aa10.72□□□□□ -0.69
CNTN1-204ENST00000547849 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
CNTN1-204ENST00000547849 CLASP1Q7Z460 1538 aa10.72□□□□□ -0.69
CNTN1-204ENST00000547849 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
CNTN1-204ENST00000547849 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
CNTN1-204ENST00000547849 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
CNTN1-204ENST00000547849 ABCA10Q8WWZ4 1543 aa10.68□□□□□ -0.7
CNTN1-204ENST00000547849 HRCP23327 699 aa10.67□□□□□ -0.7
CNTN1-204ENST00000547849 AQRO60306 1485 aaKnown RBP eCLIP10.65□□□□□ -0.7
CNTN1-204ENST00000547849 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
CNTN1-204ENST00000547849 ARHGEF11O15085 1522 aa10.62□□□□□ -0.71
CNTN1-204ENST00000547849 SOGA1O94964 1423 aa10.62□□□□□ -0.71
CNTN1-204ENST00000547849 ADAMTS12P58397 1594 aa10.62□□□□□ -0.71
CNTN1-204ENST00000547849 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
CNTN1-204ENST00000547849 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
CNTN1-204ENST00000547849 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
CNTN1-204ENST00000547849 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
CNTN1-204ENST00000547849 SLC24A1O60721 1099 aa10.59□□□□□ -0.71
CNTN1-204ENST00000547849 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
CNTN1-204ENST00000547849 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
CNTN1-204ENST00000547849 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
CNTN1-204ENST00000547849 CEP170Q5SW79 1584 aa10.55□□□□□ -0.72
CNTN1-204ENST00000547849 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
CNTN1-204ENST00000547849 ARAP1Q96P48 1450 aa10.55□□□□□ -0.72
CNTN1-204ENST00000547849 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
CNTN1-204ENST00000547849 WRNQ14191 1432 aaPredicted RBP eCLIP10.52□□□□□ -0.73
CNTN1-204ENST00000547849 NUP160Q12769 1436 aa10.52□□□□□ -0.73
CNTN1-204ENST00000547849 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
CNTN1-204ENST00000547849 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
CNTN1-204ENST00000547849 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.73
CNTN1-204ENST00000547849 CUL7Q14999 1698 aa10.46□□□□□ -0.73
CNTN1-204ENST00000547849 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
CNTN1-204ENST00000547849 FHAD1B1AJZ9 1412 aa10.44□□□□□ -0.74
CNTN1-204ENST00000547849 PCGF6Q9BYE7 350 aa10.42□□□□□ -0.74
CNTN1-204ENST00000547849 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
CNTN1-204ENST00000547849 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
CNTN1-204ENST00000547849 IGF1RP08069 1367 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms