RNA–Protein interactions for RNA: ENST00000547772.1

PXN-213, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-213ENST00000547772 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.21
PXN-213ENST00000547772 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
PXN-213ENST00000547772 ABCC9O60706 1549 aa25.63■■□□□ 1.69
PXN-213ENST00000547772 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
PXN-213ENST00000547772 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
PXN-213ENST00000547772 NACADO15069 1562 aa24.44■■□□□ 1.5
PXN-213ENST00000547772 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
PXN-213ENST00000547772 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
PXN-213ENST00000547772 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
PXN-213ENST00000547772 UNC13AQ9UPW8 1703 aa23.97■■□□□ 1.43
PXN-213ENST00000547772 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
PXN-213ENST00000547772 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
PXN-213ENST00000547772 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
PXN-213ENST00000547772 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
PXN-213ENST00000547772 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
PXN-213ENST00000547772 DNAJC5Q9H3Z4 198 aa23.41■■□□□ 1.34
PXN-213ENST00000547772 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
PXN-213ENST00000547772 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
PXN-213ENST00000547772 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PXN-213ENST00000547772 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
PXN-213ENST00000547772 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
PXN-213ENST00000547772 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
PXN-213ENST00000547772 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
PXN-213ENST00000547772 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
PXN-213ENST00000547772 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
PXN-213ENST00000547772 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
PXN-213ENST00000547772 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
PXN-213ENST00000547772 CUX2O14529 1486 aa22.23■■□□□ 1.15
PXN-213ENST00000547772 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
PXN-213ENST00000547772 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
PXN-213ENST00000547772 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
PXN-213ENST00000547772 NESP48681 1621 aa22.07■■□□□ 1.12
PXN-213ENST00000547772 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
PXN-213ENST00000547772 WIZO95785 1651 aa21.95■■□□□ 1.1
PXN-213ENST00000547772 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
PXN-213ENST00000547772 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
PXN-213ENST00000547772 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
PXN-213ENST00000547772 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
PXN-213ENST00000547772 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
PXN-213ENST00000547772 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
PXN-213ENST00000547772 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
PXN-213ENST00000547772 CFTRP13569 1480 aa21.65■■□□□ 1.06
PXN-213ENST00000547772 WDR62O43379 1518 aa21.64■■□□□ 1.05
PXN-213ENST00000547772 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
PXN-213ENST00000547772 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.05
PXN-213ENST00000547772 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
PXN-213ENST00000547772 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
PXN-213ENST00000547772 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
PXN-213ENST00000547772 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
PXN-213ENST00000547772 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
PXN-213ENST00000547772 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
PXN-213ENST00000547772 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
PXN-213ENST00000547772 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
PXN-213ENST00000547772 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
PXN-213ENST00000547772 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
PXN-213ENST00000547772 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
PXN-213ENST00000547772 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
PXN-213ENST00000547772 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
PXN-213ENST00000547772 EIF4G3O43432 1585 aaKnown RBP21.01■□□□□ 0.95
PXN-213ENST00000547772 POLA1P09884 1462 aaPredicted RBP21■□□□□ 0.95
PXN-213ENST00000547772 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
PXN-213ENST00000547772 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
PXN-213ENST00000547772 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
PXN-213ENST00000547772 CUX1P39880 1505 aa20.88■□□□□ 0.93
PXN-213ENST00000547772 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PXN-213ENST00000547772 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
PXN-213ENST00000547772 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
PXN-213ENST00000547772 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
PXN-213ENST00000547772 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
PXN-213ENST00000547772 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
PXN-213ENST00000547772 CHD1O14646 1710 aa20.8■□□□□ 0.92
PXN-213ENST00000547772 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
PXN-213ENST00000547772 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
PXN-213ENST00000547772 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
PXN-213ENST00000547772 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
PXN-213ENST00000547772 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
PXN-213ENST00000547772 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
PXN-213ENST00000547772 FBLN2P98095 1184 aa20.67■□□□□ 0.9
PXN-213ENST00000547772 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
PXN-213ENST00000547772 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
PXN-213ENST00000547772 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
PXN-213ENST00000547772 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
PXN-213ENST00000547772 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
PXN-213ENST00000547772 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
PXN-213ENST00000547772 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
PXN-213ENST00000547772 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
PXN-213ENST00000547772 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
PXN-213ENST00000547772 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
PXN-213ENST00000547772 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PXN-213ENST00000547772 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
PXN-213ENST00000547772 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
PXN-213ENST00000547772 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
PXN-213ENST00000547772 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
PXN-213ENST00000547772 NUP160Q12769 1436 aa20.39■□□□□ 0.85
PXN-213ENST00000547772 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
PXN-213ENST00000547772 SHROOM2Q13796 1616 aa20.3■□□□□ 0.84
PXN-213ENST00000547772 ILDR1Q86SU0 546 aaPredicted RBP20.27■□□□□ 0.84
PXN-213ENST00000547772 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
PXN-213ENST00000547772 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
PXN-213ENST00000547772 IGF1RP08069 1367 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms