RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
CCDC59-202ENST00000547758 AEBP2Q6ZN18 517 aaPredicted RBP34.04■■■■□ 3.04
CCDC59-202ENST00000547758 CHIC1Q5VXU3 224 aa32.18■■■□□ 2.74
CCDC59-202ENST00000547758 ABCC9O60706 1549 aa31.58■■■□□ 2.65
CCDC59-202ENST00000547758 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
CCDC59-202ENST00000547758 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
CCDC59-202ENST00000547758 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
CCDC59-202ENST00000547758 NACADO15069 1562 aa29.59■■■□□ 2.33
CCDC59-202ENST00000547758 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
CCDC59-202ENST00000547758 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
CCDC59-202ENST00000547758 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
CCDC59-202ENST00000547758 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
CCDC59-202ENST00000547758 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
CCDC59-202ENST00000547758 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
CCDC59-202ENST00000547758 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
CCDC59-202ENST00000547758 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
CCDC59-202ENST00000547758 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
CCDC59-202ENST00000547758 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
CCDC59-202ENST00000547758 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
CCDC59-202ENST00000547758 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
CCDC59-202ENST00000547758 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
CCDC59-202ENST00000547758 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
CCDC59-202ENST00000547758 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
CCDC59-202ENST00000547758 CUX2O14529 1486 aa27.42■■□□□ 1.98
CCDC59-202ENST00000547758 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
CCDC59-202ENST00000547758 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
CCDC59-202ENST00000547758 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
CCDC59-202ENST00000547758 FOXD1Q16676 465 aa27.1■■□□□ 1.93
CCDC59-202ENST00000547758 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
CCDC59-202ENST00000547758 SMARCA2P51531 1590 aa27.07■■□□□ 1.92
CCDC59-202ENST00000547758 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
CCDC59-202ENST00000547758 NESP48681 1621 aa27.01■■□□□ 1.91
CCDC59-202ENST00000547758 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
CCDC59-202ENST00000547758 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
CCDC59-202ENST00000547758 BAZ1AQ9NRL2 1556 aaPredicted RBP26.83■■□□□ 1.89
CCDC59-202ENST00000547758 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
CCDC59-202ENST00000547758 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
CCDC59-202ENST00000547758 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
CCDC59-202ENST00000547758 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
CCDC59-202ENST00000547758 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
CCDC59-202ENST00000547758 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
CCDC59-202ENST00000547758 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
CCDC59-202ENST00000547758 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
CCDC59-202ENST00000547758 WDR62O43379 1518 aa26.39■■□□□ 1.81
CCDC59-202ENST00000547758 WIZO95785 1651 aa26.28■■□□□ 1.8
CCDC59-202ENST00000547758 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
CCDC59-202ENST00000547758 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
CCDC59-202ENST00000547758 CFTRP13569 1480 aa26.04■■□□□ 1.76
CCDC59-202ENST00000547758 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
CCDC59-202ENST00000547758 URB2Q14146 1524 aaKnown RBP25.96■■□□□ 1.75
CCDC59-202ENST00000547758 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
CCDC59-202ENST00000547758 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
CCDC59-202ENST00000547758 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
CCDC59-202ENST00000547758 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
CCDC59-202ENST00000547758 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
CCDC59-202ENST00000547758 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
CCDC59-202ENST00000547758 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
CCDC59-202ENST00000547758 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
CCDC59-202ENST00000547758 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
CCDC59-202ENST00000547758 PLPPR3Q6T4P5 718 aa25.64■■□□□ 1.7
CCDC59-202ENST00000547758 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
CCDC59-202ENST00000547758 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
CCDC59-202ENST00000547758 CCDC88BA6NC98 1476 aa25.57■■□□□ 1.68
CCDC59-202ENST00000547758 CHD1O14646 1710 aa25.54■■□□□ 1.68
CCDC59-202ENST00000547758 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
CCDC59-202ENST00000547758 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
CCDC59-202ENST00000547758 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
CCDC59-202ENST00000547758 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
CCDC59-202ENST00000547758 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCDC59-202ENST00000547758 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
CCDC59-202ENST00000547758 MSH5O43196 834 aa25.37■■□□□ 1.65
CCDC59-202ENST00000547758 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
CCDC59-202ENST00000547758 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
CCDC59-202ENST00000547758 FBLN2P98095 1184 aa25.29■■□□□ 1.64
CCDC59-202ENST00000547758 PIAS4Q8N2W9 510 aaPredicted RBP25.29■■□□□ 1.64
CCDC59-202ENST00000547758 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
CCDC59-202ENST00000547758 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
CCDC59-202ENST00000547758 ADRA2BP18089 450 aa25.18■■□□□ 1.62
CCDC59-202ENST00000547758 WDR97A6NE52 1622 aa25.18■■□□□ 1.62
CCDC59-202ENST00000547758 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
CCDC59-202ENST00000547758 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
CCDC59-202ENST00000547758 SOGA1O94964 1423 aa25.15■■□□□ 1.62
CCDC59-202ENST00000547758 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
CCDC59-202ENST00000547758 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
CCDC59-202ENST00000547758 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
CCDC59-202ENST00000547758 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
CCDC59-202ENST00000547758 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
CCDC59-202ENST00000547758 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
CCDC59-202ENST00000547758 POTEDQ86YR6 584 aa25.01■■□□□ 1.59
CCDC59-202ENST00000547758 CUX1P39880 1505 aa25.01■■□□□ 1.59
CCDC59-202ENST00000547758 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
CCDC59-202ENST00000547758 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
CCDC59-202ENST00000547758 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
CCDC59-202ENST00000547758 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
CCDC59-202ENST00000547758 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
CCDC59-202ENST00000547758 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
CCDC59-202ENST00000547758 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
CCDC59-202ENST00000547758 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
CCDC59-202ENST00000547758 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
CCDC59-202ENST00000547758 NUP160Q12769 1436 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms