RNA–Protein interactions for RNA: ENST00000547746.1

PXN-212, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-212ENST00000547746 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
PXN-212ENST00000547746 CCDC180Q9P1Z9 1646 aa39.56■■■■□ 3.92
PXN-212ENST00000547746 ABCC9O60706 1549 aa39.48■■■■□ 3.91
PXN-212ENST00000547746 RB1CC1Q8TDY2 1594 aa37.63■■■■□ 3.61
PXN-212ENST00000547746 NACADO15069 1562 aa37.42■■■■□ 3.58
PXN-212ENST00000547746 DCAF8L2P0C7V8 631 aa37.33■■■■□ 3.57
PXN-212ENST00000547746 MYO15BQ96JP2 1530 aa36.96■■■■□ 3.51
PXN-212ENST00000547746 DNAJC5BQ9UF47 199 aa36.96■■■■□ 3.51
PXN-212ENST00000547746 PABPN1Q86U42 306 aaKnown RBP eCLIP36.83■■■■□ 3.49
PXN-212ENST00000547746 UNC13AQ9UPW8 1703 aa36.7■■■■□ 3.47
PXN-212ENST00000547746 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
PXN-212ENST00000547746 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
PXN-212ENST00000547746 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
PXN-212ENST00000547746 SCRIBQ14160 1630 aa36.07■■■■□ 3.36
PXN-212ENST00000547746 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
PXN-212ENST00000547746 CC2D2AQ9P2K1 1620 aa35.65■■■■□ 3.3
PXN-212ENST00000547746 EIF4G1Q04637 1599 aaKnown RBP35.62■■■■□ 3.29
PXN-212ENST00000547746 CECR2Q9BXF3 1484 aa35.56■■■■□ 3.28
PXN-212ENST00000547746 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
PXN-212ENST00000547746 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
PXN-212ENST00000547746 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
PXN-212ENST00000547746 SMARCA2P51531 1590 aa34.36■■■■□ 3.09
PXN-212ENST00000547746 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
PXN-212ENST00000547746 HMGXB3Q12766 1538 aa34.29■■■■□ 3.08
PXN-212ENST00000547746 BAZ1BQ9UIG0 1483 aaKnown RBP34.14■■■■□ 3.06
PXN-212ENST00000547746 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
PXN-212ENST00000547746 ERCC6Q03468 1493 aa34.07■■■■□ 3.05
PXN-212ENST00000547746 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.05
PXN-212ENST00000547746 CUX2O14529 1486 aa33.96■■■■□ 3.03
PXN-212ENST00000547746 NESP48681 1621 aa33.96■■■■□ 3.03
PXN-212ENST00000547746 DNAJC5Q9H3Z4 198 aa33.85■■■■□ 3.01
PXN-212ENST00000547746 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
PXN-212ENST00000547746 WIZO95785 1651 aa33.64■■■□□ 2.98
PXN-212ENST00000547746 PDS5BQ9NTI5 1447 aa33.58■■■□□ 2.97
PXN-212ENST00000547746 CADPSQ9ULU8 1353 aa33.54■■■□□ 2.96
PXN-212ENST00000547746 THOC2Q8NI27 1593 aaKnown RBP33.54■■■□□ 2.96
PXN-212ENST00000547746 KIF21AQ7Z4S6 1674 aa33.46■■■□□ 2.95
PXN-212ENST00000547746 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
PXN-212ENST00000547746 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
PXN-212ENST00000547746 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
PXN-212ENST00000547746 CFTRP13569 1480 aa33.18■■■□□ 2.9
PXN-212ENST00000547746 WDR62O43379 1518 aa33.14■■■□□ 2.9
PXN-212ENST00000547746 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
PXN-212ENST00000547746 FANCD2Q9BXW9 1451 aa33.13■■■□□ 2.89
PXN-212ENST00000547746 CCDC88BA6NC98 1476 aa32.9■■■□□ 2.86
PXN-212ENST00000547746 URB2Q14146 1524 aaKnown RBP32.84■■■□□ 2.85
PXN-212ENST00000547746 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
PXN-212ENST00000547746 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
PXN-212ENST00000547746 TOPBP1Q92547 1522 aa32.51■■■□□ 2.79
PXN-212ENST00000547746 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
PXN-212ENST00000547746 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
PXN-212ENST00000547746 ZNF608Q9ULD9 1512 aaPredicted RBP32.41■■■□□ 2.78
PXN-212ENST00000547746 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
PXN-212ENST00000547746 DNMBPQ6XZF7 1577 aa32.39■■■□□ 2.78
PXN-212ENST00000547746 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
PXN-212ENST00000547746 POLA1P09884 1462 aaPredicted RBP32.19■■■□□ 2.74
PXN-212ENST00000547746 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
PXN-212ENST00000547746 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
PXN-212ENST00000547746 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
PXN-212ENST00000547746 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
PXN-212ENST00000547746 SOGA1O94964 1423 aa32.08■■■□□ 2.73
PXN-212ENST00000547746 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.71
PXN-212ENST00000547746 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
PXN-212ENST00000547746 CUX1P39880 1505 aa32■■■□□ 2.71
PXN-212ENST00000547746 RIMBP3CA6NJZ7 1639 aa31.97■■■□□ 2.71
PXN-212ENST00000547746 RIMBP3BA6NNM3 1639 aa31.97■■■□□ 2.71
PXN-212ENST00000547746 RIMBP3Q9UFD9 1639 aa31.97■■■□□ 2.71
PXN-212ENST00000547746 FBLN2P98095 1184 aa31.95■■■□□ 2.71
PXN-212ENST00000547746 ARHGEF11O15085 1522 aa31.91■■■□□ 2.7
PXN-212ENST00000547746 CHD1O14646 1710 aa31.91■■■□□ 2.7
PXN-212ENST00000547746 WDR97A6NE52 1622 aa31.87■■■□□ 2.69
PXN-212ENST00000547746 SNAPC4Q5SXM2 1469 aa31.81■■■□□ 2.68
PXN-212ENST00000547746 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
PXN-212ENST00000547746 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
PXN-212ENST00000547746 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
PXN-212ENST00000547746 CYB5RLQ6IPT4 315 aa31.73■■■□□ 2.67
PXN-212ENST00000547746 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
PXN-212ENST00000547746 ABCA10Q8WWZ4 1543 aa31.66■■■□□ 2.66
PXN-212ENST00000547746 SYNJ2O15056 1496 aa31.64■■■□□ 2.66
PXN-212ENST00000547746 ARAP1Q96P48 1450 aa31.61■■■□□ 2.65
PXN-212ENST00000547746 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
PXN-212ENST00000547746 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
PXN-212ENST00000547746 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
PXN-212ENST00000547746 PBRM1Q86U86 1689 aa31.57■■■□□ 2.64
PXN-212ENST00000547746 ABCA5Q8WWZ7 1642 aa31.55■■■□□ 2.64
PXN-212ENST00000547746 TOP2BQ02880 1626 aa31.51■■■□□ 2.63
PXN-212ENST00000547746 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
PXN-212ENST00000547746 GRIN2AQ12879 1464 aa31.34■■■□□ 2.61
PXN-212ENST00000547746 TRHP20396 242 aaPredicted RBP31.33■■■□□ 2.61
PXN-212ENST00000547746 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
PXN-212ENST00000547746 FHAD1B1AJZ9 1412 aa31.29■■■□□ 2.6
PXN-212ENST00000547746 ERICH3Q5RHP9 1530 aa31.26■■■□□ 2.59
PXN-212ENST00000547746 NUP160Q12769 1436 aa31.25■■■□□ 2.59
PXN-212ENST00000547746 CEP170Q5SW79 1584 aa31.2■■■□□ 2.58
PXN-212ENST00000547746 ERCC6L2Q5T890 1561 aa31.11■■■□□ 2.57
PXN-212ENST00000547746 SHROOM2Q13796 1616 aa31.05■■■□□ 2.56
PXN-212ENST00000547746 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
PXN-212ENST00000547746 IGF1RP08069 1367 aa30.95■■■□□ 2.55
PXN-212ENST00000547746 KIF27Q86VH2 1401 aa30.95■■■□□ 2.54
PXN-212ENST00000547746 PRG4Q92954 1404 aaPredicted RBP30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms