RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
CACNB3-206ENST00000547693 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
CACNB3-206ENST00000547693 ABCC9O60706 1549 aa20.74■□□□□ 0.91
CACNB3-206ENST00000547693 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
CACNB3-206ENST00000547693 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
CACNB3-206ENST00000547693 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
CACNB3-206ENST00000547693 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
CACNB3-206ENST00000547693 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
CACNB3-206ENST00000547693 NACADO15069 1562 aa19.78■□□□□ 0.76
CACNB3-206ENST00000547693 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
CACNB3-206ENST00000547693 SHROOM4Q9ULL8 1493 aa19.33■□□□□ 0.68
CACNB3-206ENST00000547693 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
CACNB3-206ENST00000547693 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
CACNB3-206ENST00000547693 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
CACNB3-206ENST00000547693 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
CACNB3-206ENST00000547693 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
CACNB3-206ENST00000547693 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
CACNB3-206ENST00000547693 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
CACNB3-206ENST00000547693 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
CACNB3-206ENST00000547693 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-206ENST00000547693 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
CACNB3-206ENST00000547693 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
CACNB3-206ENST00000547693 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
CACNB3-206ENST00000547693 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
CACNB3-206ENST00000547693 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
CACNB3-206ENST00000547693 WIZO95785 1651 aa18.34■□□□□ 0.53
CACNB3-206ENST00000547693 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
CACNB3-206ENST00000547693 CUX2O14529 1486 aa18.3■□□□□ 0.52
CACNB3-206ENST00000547693 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
CACNB3-206ENST00000547693 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
CACNB3-206ENST00000547693 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
CACNB3-206ENST00000547693 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
CACNB3-206ENST00000547693 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
CACNB3-206ENST00000547693 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
CACNB3-206ENST00000547693 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
CACNB3-206ENST00000547693 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
CACNB3-206ENST00000547693 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
CACNB3-206ENST00000547693 CFTRP13569 1480 aa17.72■□□□□ 0.43
CACNB3-206ENST00000547693 LAMC3Q9Y6N6 1575 aa17.67■□□□□ 0.42
CACNB3-206ENST00000547693 NESP48681 1621 aa17.66■□□□□ 0.42
CACNB3-206ENST00000547693 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
CACNB3-206ENST00000547693 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CACNB3-206ENST00000547693 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
CACNB3-206ENST00000547693 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
CACNB3-206ENST00000547693 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
CACNB3-206ENST00000547693 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
CACNB3-206ENST00000547693 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
CACNB3-206ENST00000547693 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
CACNB3-206ENST00000547693 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
CACNB3-206ENST00000547693 WDR62O43379 1518 aa17.37■□□□□ 0.37
CACNB3-206ENST00000547693 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
CACNB3-206ENST00000547693 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
CACNB3-206ENST00000547693 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
CACNB3-206ENST00000547693 CUX1P39880 1505 aa17.32■□□□□ 0.36
CACNB3-206ENST00000547693 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
CACNB3-206ENST00000547693 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
CACNB3-206ENST00000547693 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
CACNB3-206ENST00000547693 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
CACNB3-206ENST00000547693 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
CACNB3-206ENST00000547693 SOGA1O94964 1423 aa17.18■□□□□ 0.34
CACNB3-206ENST00000547693 EEA1Q15075 1411 aa17.17■□□□□ 0.34
CACNB3-206ENST00000547693 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CACNB3-206ENST00000547693 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
CACNB3-206ENST00000547693 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
CACNB3-206ENST00000547693 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
CACNB3-206ENST00000547693 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-206ENST00000547693 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-206ENST00000547693 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
CACNB3-206ENST00000547693 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
CACNB3-206ENST00000547693 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
CACNB3-206ENST00000547693 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
CACNB3-206ENST00000547693 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
CACNB3-206ENST00000547693 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
CACNB3-206ENST00000547693 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
CACNB3-206ENST00000547693 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
CACNB3-206ENST00000547693 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
CACNB3-206ENST00000547693 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CACNB3-206ENST00000547693 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
CACNB3-206ENST00000547693 IGF1RP08069 1367 aa16.94■□□□□ 0.3
CACNB3-206ENST00000547693 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
CACNB3-206ENST00000547693 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.3
CACNB3-206ENST00000547693 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
CACNB3-206ENST00000547693 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
CACNB3-206ENST00000547693 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
CACNB3-206ENST00000547693 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
CACNB3-206ENST00000547693 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-206ENST00000547693 KIF21BO75037 1637 aa16.86■□□□□ 0.29
CACNB3-206ENST00000547693 CUL7Q14999 1698 aa16.86■□□□□ 0.29
CACNB3-206ENST00000547693 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
CACNB3-206ENST00000547693 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
CACNB3-206ENST00000547693 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
CACNB3-206ENST00000547693 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
CACNB3-206ENST00000547693 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
CACNB3-206ENST00000547693 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
CACNB3-206ENST00000547693 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
CACNB3-206ENST00000547693 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
CACNB3-206ENST00000547693 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
CACNB3-206ENST00000547693 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-206ENST00000547693 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-206ENST00000547693 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms