RNA–Protein interactions for RNA: ENST00000547543.5

WDR90-208, Transcript of WD repeat domain 90, humanhuman

TSL 5

Gene WDR90, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-208ENST00000547543 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
WDR90-208ENST00000547543 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
WDR90-208ENST00000547543 ABCC9O60706 1549 aa40.99■■■■■ 4.15
WDR90-208ENST00000547543 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
WDR90-208ENST00000547543 DCAF8L2P0C7V8 631 aa39.22■■■■□ 3.87
WDR90-208ENST00000547543 NACADO15069 1562 aa39.14■■■■□ 3.86
WDR90-208ENST00000547543 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
WDR90-208ENST00000547543 MYO15BQ96JP2 1530 aa38.75■■■■□ 3.79
WDR90-208ENST00000547543 DCAF1Q9Y4B6 1507 aa38.5■■■■□ 3.75
WDR90-208ENST00000547543 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.72
WDR90-208ENST00000547543 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
WDR90-208ENST00000547543 BICRAQ9NZM4 1560 aa37.99■■■■□ 3.67
WDR90-208ENST00000547543 SCRIBQ14160 1630 aa37.98■■■■□ 3.67
WDR90-208ENST00000547543 DNAJC5BQ9UF47 199 aa37.72■■■■□ 3.63
WDR90-208ENST00000547543 SHROOM4Q9ULL8 1493 aa37.66■■■■□ 3.62
WDR90-208ENST00000547543 EIF4G1Q04637 1599 aaKnown RBP37.1■■■■□ 3.53
WDR90-208ENST00000547543 CC2D2AQ9P2K1 1620 aa37.01■■■■□ 3.52
WDR90-208ENST00000547543 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
WDR90-208ENST00000547543 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
WDR90-208ENST00000547543 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
WDR90-208ENST00000547543 ATAD2BQ9ULI0 1458 aa36.09■■■■□ 3.37
WDR90-208ENST00000547543 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
WDR90-208ENST00000547543 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
WDR90-208ENST00000547543 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
WDR90-208ENST00000547543 MROH2BQ7Z745 1585 aa35.9■■■■□ 3.34
WDR90-208ENST00000547543 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
WDR90-208ENST00000547543 PEG3Q9GZU2 1588 aa35.81■■■■□ 3.32
WDR90-208ENST00000547543 WIZO95785 1651 aa35.5■■■■□ 3.27
WDR90-208ENST00000547543 ERCC6Q03468 1493 aa35.45■■■■□ 3.27
WDR90-208ENST00000547543 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
WDR90-208ENST00000547543 NESP48681 1621 aa35.34■■■■□ 3.25
WDR90-208ENST00000547543 LAMC3Q9Y6N6 1575 aa35.23■■■■□ 3.23
WDR90-208ENST00000547543 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
WDR90-208ENST00000547543 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
WDR90-208ENST00000547543 CUX2O14529 1486 aa35.06■■■■□ 3.2
WDR90-208ENST00000547543 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
WDR90-208ENST00000547543 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
WDR90-208ENST00000547543 THOC2Q8NI27 1593 aaKnown RBP34.85■■■■□ 3.17
WDR90-208ENST00000547543 CFTRP13569 1480 aa34.78■■■■□ 3.16
WDR90-208ENST00000547543 CEP164Q9UPV0 1460 aa34.72■■■■□ 3.15
WDR90-208ENST00000547543 CCDC88BA6NC98 1476 aa34.71■■■■□ 3.15
WDR90-208ENST00000547543 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
WDR90-208ENST00000547543 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
WDR90-208ENST00000547543 WDR62O43379 1518 aa34.55■■■■□ 3.12
WDR90-208ENST00000547543 PRDM2Q13029 1718 aa34.46■■■■□ 3.11
WDR90-208ENST00000547543 SUPT5HO00267 1087 aaKnown RBP34.43■■■■□ 3.1
WDR90-208ENST00000547543 URB2Q14146 1524 aaKnown RBP34.32■■■■□ 3.08
WDR90-208ENST00000547543 DNAJC5Q9H3Z4 198 aa34.24■■■■□ 3.07
WDR90-208ENST00000547543 ABCC8Q09428 1581 aa34.09■■■■□ 3.05
WDR90-208ENST00000547543 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
WDR90-208ENST00000547543 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
WDR90-208ENST00000547543 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
WDR90-208ENST00000547543 ZNF608Q9ULD9 1512 aaPredicted RBP33.8■■■■□ 3
WDR90-208ENST00000547543 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
WDR90-208ENST00000547543 CUX1P39880 1505 aa33.71■■■□□ 2.99
WDR90-208ENST00000547543 EIF4G3O43432 1585 aaKnown RBP33.69■■■□□ 2.98
WDR90-208ENST00000547543 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
WDR90-208ENST00000547543 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
WDR90-208ENST00000547543 SOGA1O94964 1423 aa33.66■■■□□ 2.98
WDR90-208ENST00000547543 RAD54L2Q9Y4B4 1467 aa33.64■■■□□ 2.98
WDR90-208ENST00000547543 AQRO60306 1485 aaKnown RBP eCLIP33.59■■■□□ 2.97
WDR90-208ENST00000547543 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
WDR90-208ENST00000547543 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.96
WDR90-208ENST00000547543 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.95
WDR90-208ENST00000547543 WDR97A6NE52 1622 aa33.45■■■□□ 2.95
WDR90-208ENST00000547543 FBLN2P98095 1184 aa33.38■■■□□ 2.93
WDR90-208ENST00000547543 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
WDR90-208ENST00000547543 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
WDR90-208ENST00000547543 SNAPC4Q5SXM2 1469 aa33.33■■■□□ 2.93
WDR90-208ENST00000547543 BIVM-ERCC5R4GMW8 1640 aa33.33■■■□□ 2.93
WDR90-208ENST00000547543 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
WDR90-208ENST00000547543 ABCA10Q8WWZ4 1543 aa33.31■■■□□ 2.92
WDR90-208ENST00000547543 CHD1O14646 1710 aa33.28■■■□□ 2.92
WDR90-208ENST00000547543 GAPVD1Q14C86 1478 aa33.27■■■□□ 2.92
WDR90-208ENST00000547543 MAGI1Q96QZ7 1491 aaPredicted RBP33.25■■■□□ 2.91
WDR90-208ENST00000547543 PBRM1Q86U86 1689 aa33.2■■■□□ 2.9
WDR90-208ENST00000547543 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
WDR90-208ENST00000547543 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
WDR90-208ENST00000547543 TRIM41Q8WV44 630 aa33.18■■■□□ 2.9
WDR90-208ENST00000547543 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
WDR90-208ENST00000547543 RIMBP3CA6NJZ7 1639 aa33.03■■■□□ 2.88
WDR90-208ENST00000547543 RIMBP3BA6NNM3 1639 aa33.03■■■□□ 2.88
WDR90-208ENST00000547543 RIMBP3Q9UFD9 1639 aa33.03■■■□□ 2.88
WDR90-208ENST00000547543 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
WDR90-208ENST00000547543 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
WDR90-208ENST00000547543 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
WDR90-208ENST00000547543 CLASP1Q7Z460 1538 aa32.9■■■□□ 2.86
WDR90-208ENST00000547543 FHAD1B1AJZ9 1412 aa32.88■■■□□ 2.85
WDR90-208ENST00000547543 GRIN2AQ12879 1464 aa32.87■■■□□ 2.85
WDR90-208ENST00000547543 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
WDR90-208ENST00000547543 CYB5RLQ6IPT4 315 aa32.77■■■□□ 2.84
WDR90-208ENST00000547543 ARAP1Q96P48 1450 aa32.72■■■□□ 2.83
WDR90-208ENST00000547543 NUP160Q12769 1436 aa32.69■■■□□ 2.82
WDR90-208ENST00000547543 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
WDR90-208ENST00000547543 CUL7Q14999 1698 aa32.59■■■□□ 2.81
WDR90-208ENST00000547543 IGF1RP08069 1367 aa32.59■■■□□ 2.81
WDR90-208ENST00000547543 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
WDR90-208ENST00000547543 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
WDR90-208ENST00000547543 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
WDR90-208ENST00000547543 ERCC6L2Q5T890 1561 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms