RNA–Protein interactions for RNA: ENST00000547487.5

MMP19-204, Transcript of matrix metallopeptidase 19, humanhuman

TSL 4

Gene MMP19, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-204ENST00000547487 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
MMP19-204ENST00000547487 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
MMP19-204ENST00000547487 ABCC9O60706 1549 aa28.13■■■□□ 2.09
MMP19-204ENST00000547487 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
MMP19-204ENST00000547487 NACADO15069 1562 aa26.93■■□□□ 1.9
MMP19-204ENST00000547487 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
MMP19-204ENST00000547487 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
MMP19-204ENST00000547487 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
MMP19-204ENST00000547487 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
MMP19-204ENST00000547487 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
MMP19-204ENST00000547487 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
MMP19-204ENST00000547487 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
MMP19-204ENST00000547487 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
MMP19-204ENST00000547487 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
MMP19-204ENST00000547487 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
MMP19-204ENST00000547487 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
MMP19-204ENST00000547487 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
MMP19-204ENST00000547487 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
MMP19-204ENST00000547487 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
MMP19-204ENST00000547487 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
MMP19-204ENST00000547487 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
MMP19-204ENST00000547487 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
MMP19-204ENST00000547487 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
MMP19-204ENST00000547487 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
MMP19-204ENST00000547487 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
MMP19-204ENST00000547487 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
MMP19-204ENST00000547487 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
MMP19-204ENST00000547487 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
MMP19-204ENST00000547487 WIZO95785 1651 aa24.41■■□□□ 1.5
MMP19-204ENST00000547487 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
MMP19-204ENST00000547487 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
MMP19-204ENST00000547487 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
MMP19-204ENST00000547487 NESP48681 1621 aa24.24■■□□□ 1.47
MMP19-204ENST00000547487 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
MMP19-204ENST00000547487 CUX2O14529 1486 aa24.12■■□□□ 1.45
MMP19-204ENST00000547487 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
MMP19-204ENST00000547487 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
MMP19-204ENST00000547487 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
MMP19-204ENST00000547487 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
MMP19-204ENST00000547487 CFTRP13569 1480 aa23.87■■□□□ 1.41
MMP19-204ENST00000547487 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
MMP19-204ENST00000547487 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
MMP19-204ENST00000547487 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
MMP19-204ENST00000547487 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
MMP19-204ENST00000547487 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
MMP19-204ENST00000547487 WDR62O43379 1518 aa23.74■■□□□ 1.39
MMP19-204ENST00000547487 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
MMP19-204ENST00000547487 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
MMP19-204ENST00000547487 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
MMP19-204ENST00000547487 DNMBPQ6XZF7 1577 aa23.42■■□□□ 1.34
MMP19-204ENST00000547487 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
MMP19-204ENST00000547487 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
MMP19-204ENST00000547487 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
MMP19-204ENST00000547487 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
MMP19-204ENST00000547487 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
MMP19-204ENST00000547487 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
MMP19-204ENST00000547487 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
MMP19-204ENST00000547487 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
MMP19-204ENST00000547487 CUX1P39880 1505 aa23.13■■□□□ 1.29
MMP19-204ENST00000547487 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
MMP19-204ENST00000547487 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
MMP19-204ENST00000547487 SOGA1O94964 1423 aa23.12■■□□□ 1.29
MMP19-204ENST00000547487 RAD54L2Q9Y4B4 1467 aa23.08■■□□□ 1.29
MMP19-204ENST00000547487 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
MMP19-204ENST00000547487 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
MMP19-204ENST00000547487 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
MMP19-204ENST00000547487 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.28
MMP19-204ENST00000547487 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
MMP19-204ENST00000547487 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
MMP19-204ENST00000547487 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
MMP19-204ENST00000547487 CHD1O14646 1710 aa22.94■■□□□ 1.26
MMP19-204ENST00000547487 FBLN2P98095 1184 aa22.93■■□□□ 1.26
MMP19-204ENST00000547487 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
MMP19-204ENST00000547487 PBRM1Q86U86 1689 aa22.89■■□□□ 1.25
MMP19-204ENST00000547487 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
MMP19-204ENST00000547487 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
MMP19-204ENST00000547487 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
MMP19-204ENST00000547487 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
MMP19-204ENST00000547487 EEA1Q15075 1411 aa22.86■■□□□ 1.25
MMP19-204ENST00000547487 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
MMP19-204ENST00000547487 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
MMP19-204ENST00000547487 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
MMP19-204ENST00000547487 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
MMP19-204ENST00000547487 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
MMP19-204ENST00000547487 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
MMP19-204ENST00000547487 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
MMP19-204ENST00000547487 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
MMP19-204ENST00000547487 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
MMP19-204ENST00000547487 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.21
MMP19-204ENST00000547487 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
MMP19-204ENST00000547487 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
MMP19-204ENST00000547487 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
MMP19-204ENST00000547487 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
MMP19-204ENST00000547487 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
MMP19-204ENST00000547487 CUL7Q14999 1698 aa22.47■■□□□ 1.19
MMP19-204ENST00000547487 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
MMP19-204ENST00000547487 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
MMP19-204ENST00000547487 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
MMP19-204ENST00000547487 IGF1RP08069 1367 aa22.44■■□□□ 1.18
MMP19-204ENST00000547487 NUP160Q12769 1436 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms