RNA–Protein interactions for RNA: ENST00000547342.1

SDS-204, Transcript of serine dehydratase, humanhuman

TSL 5

Gene SDS, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-204ENST00000547342 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
SDS-204ENST00000547342 ABCC9O60706 1549 aa25.58■■□□□ 1.68
SDS-204ENST00000547342 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
SDS-204ENST00000547342 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
SDS-204ENST00000547342 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
SDS-204ENST00000547342 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
SDS-204ENST00000547342 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
SDS-204ENST00000547342 NACADO15069 1562 aa23.46■■□□□ 1.35
SDS-204ENST00000547342 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
SDS-204ENST00000547342 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
SDS-204ENST00000547342 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
SDS-204ENST00000547342 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SDS-204ENST00000547342 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
SDS-204ENST00000547342 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
SDS-204ENST00000547342 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
SDS-204ENST00000547342 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
SDS-204ENST00000547342 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
SDS-204ENST00000547342 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
SDS-204ENST00000547342 CUX2O14529 1486 aa22.37■■□□□ 1.17
SDS-204ENST00000547342 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.16
SDS-204ENST00000547342 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
SDS-204ENST00000547342 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
SDS-204ENST00000547342 NESP48681 1621 aa21.71■■□□□ 1.07
SDS-204ENST00000547342 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
SDS-204ENST00000547342 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
SDS-204ENST00000547342 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
SDS-204ENST00000547342 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
SDS-204ENST00000547342 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
SDS-204ENST00000547342 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
SDS-204ENST00000547342 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
SDS-204ENST00000547342 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
SDS-204ENST00000547342 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
SDS-204ENST00000547342 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
SDS-204ENST00000547342 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
SDS-204ENST00000547342 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
SDS-204ENST00000547342 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
SDS-204ENST00000547342 WDR62O43379 1518 aa21.11■□□□□ 0.97
SDS-204ENST00000547342 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SDS-204ENST00000547342 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SDS-204ENST00000547342 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SDS-204ENST00000547342 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
SDS-204ENST00000547342 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
SDS-204ENST00000547342 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
SDS-204ENST00000547342 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
SDS-204ENST00000547342 ARHGEF11O15085 1522 aa20.89■□□□□ 0.94
SDS-204ENST00000547342 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
SDS-204ENST00000547342 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
SDS-204ENST00000547342 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
SDS-204ENST00000547342 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
SDS-204ENST00000547342 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
SDS-204ENST00000547342 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
SDS-204ENST00000547342 WIZO95785 1651 aa20.62■□□□□ 0.89
SDS-204ENST00000547342 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
SDS-204ENST00000547342 CFTRP13569 1480 aa20.55■□□□□ 0.88
SDS-204ENST00000547342 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
SDS-204ENST00000547342 CHD1O14646 1710 aa20.45■□□□□ 0.86
SDS-204ENST00000547342 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
SDS-204ENST00000547342 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
SDS-204ENST00000547342 FBLN2P98095 1184 aa20.36■□□□□ 0.85
SDS-204ENST00000547342 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
SDS-204ENST00000547342 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
SDS-204ENST00000547342 PRDM2Q13029 1718 aa20.27■□□□□ 0.83
SDS-204ENST00000547342 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
SDS-204ENST00000547342 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
SDS-204ENST00000547342 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
SDS-204ENST00000547342 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
SDS-204ENST00000547342 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
SDS-204ENST00000547342 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
SDS-204ENST00000547342 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
SDS-204ENST00000547342 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
SDS-204ENST00000547342 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
SDS-204ENST00000547342 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
SDS-204ENST00000547342 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
SDS-204ENST00000547342 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
SDS-204ENST00000547342 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
SDS-204ENST00000547342 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
SDS-204ENST00000547342 SOGA1O94964 1423 aa19.89■□□□□ 0.77
SDS-204ENST00000547342 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
SDS-204ENST00000547342 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
SDS-204ENST00000547342 KIF13AQ9H1H9 1805 aa19.88■□□□□ 0.77
SDS-204ENST00000547342 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
SDS-204ENST00000547342 WDR97A6NE52 1622 aa19.83■□□□□ 0.76
SDS-204ENST00000547342 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.76
SDS-204ENST00000547342 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
SDS-204ENST00000547342 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
SDS-204ENST00000547342 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
SDS-204ENST00000547342 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
SDS-204ENST00000547342 FAM69CQ0P6D2 419 aa19.66■□□□□ 0.74
SDS-204ENST00000547342 KDM6BO15054 1643 aa19.62■□□□□ 0.73
SDS-204ENST00000547342 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
SDS-204ENST00000547342 CUX1P39880 1505 aa19.58■□□□□ 0.73
SDS-204ENST00000547342 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
SDS-204ENST00000547342 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
SDS-204ENST00000547342 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
SDS-204ENST00000547342 DIP2BQ9P265 1576 aa19.53■□□□□ 0.72
SDS-204ENST00000547342 NUP160Q12769 1436 aa19.52■□□□□ 0.72
SDS-204ENST00000547342 HECW2Q9P2P5 1572 aa19.52■□□□□ 0.71
SDS-204ENST00000547342 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
SDS-204ENST00000547342 TSPOAP1O95153 1857 aa19.51■□□□□ 0.71
SDS-204ENST00000547342 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms