RNA–Protein interactions for RNA: ENST00000547290.1

DDX23-204, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-204ENST00000547290 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
DDX23-204ENST00000547290 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
DDX23-204ENST00000547290 ABCC9O60706 1549 aa20.72■□□□□ 0.91
DDX23-204ENST00000547290 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
DDX23-204ENST00000547290 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
DDX23-204ENST00000547290 NACADO15069 1562 aa19.53■□□□□ 0.72
DDX23-204ENST00000547290 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
DDX23-204ENST00000547290 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
DDX23-204ENST00000547290 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
DDX23-204ENST00000547290 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX23-204ENST00000547290 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
DDX23-204ENST00000547290 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
DDX23-204ENST00000547290 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
DDX23-204ENST00000547290 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
DDX23-204ENST00000547290 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
DDX23-204ENST00000547290 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
DDX23-204ENST00000547290 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
DDX23-204ENST00000547290 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
DDX23-204ENST00000547290 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
DDX23-204ENST00000547290 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
DDX23-204ENST00000547290 CUX2O14529 1486 aa17.97■□□□□ 0.47
DDX23-204ENST00000547290 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
DDX23-204ENST00000547290 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
DDX23-204ENST00000547290 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
DDX23-204ENST00000547290 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
DDX23-204ENST00000547290 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
DDX23-204ENST00000547290 NESP48681 1621 aa17.82■□□□□ 0.44
DDX23-204ENST00000547290 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
DDX23-204ENST00000547290 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
DDX23-204ENST00000547290 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
DDX23-204ENST00000547290 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
DDX23-204ENST00000547290 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
DDX23-204ENST00000547290 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
DDX23-204ENST00000547290 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
DDX23-204ENST00000547290 WIZO95785 1651 aa17.48■□□□□ 0.39
DDX23-204ENST00000547290 WDR62O43379 1518 aa17.45■□□□□ 0.38
DDX23-204ENST00000547290 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
DDX23-204ENST00000547290 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
DDX23-204ENST00000547290 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
DDX23-204ENST00000547290 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
DDX23-204ENST00000547290 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
DDX23-204ENST00000547290 CFTRP13569 1480 aa17.23■□□□□ 0.35
DDX23-204ENST00000547290 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
DDX23-204ENST00000547290 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
DDX23-204ENST00000547290 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
DDX23-204ENST00000547290 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
DDX23-204ENST00000547290 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
DDX23-204ENST00000547290 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
DDX23-204ENST00000547290 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
DDX23-204ENST00000547290 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
DDX23-204ENST00000547290 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
DDX23-204ENST00000547290 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
DDX23-204ENST00000547290 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
DDX23-204ENST00000547290 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
DDX23-204ENST00000547290 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
DDX23-204ENST00000547290 CHD1O14646 1710 aa16.9■□□□□ 0.3
DDX23-204ENST00000547290 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
DDX23-204ENST00000547290 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
DDX23-204ENST00000547290 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
DDX23-204ENST00000547290 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
DDX23-204ENST00000547290 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
DDX23-204ENST00000547290 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
DDX23-204ENST00000547290 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
DDX23-204ENST00000547290 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
DDX23-204ENST00000547290 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.268e-7■■■□□ 17.2
DDX23-204ENST00000547290 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
DDX23-204ENST00000547290 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
DDX23-204ENST00000547290 CUX1P39880 1505 aa16.61■□□□□ 0.25
DDX23-204ENST00000547290 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
DDX23-204ENST00000547290 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
DDX23-204ENST00000547290 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
DDX23-204ENST00000547290 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
DDX23-204ENST00000547290 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
DDX23-204ENST00000547290 SOGA1O94964 1423 aa16.53■□□□□ 0.24
DDX23-204ENST00000547290 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
DDX23-204ENST00000547290 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
DDX23-204ENST00000547290 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
DDX23-204ENST00000547290 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
DDX23-204ENST00000547290 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
DDX23-204ENST00000547290 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
DDX23-204ENST00000547290 FBLN2P98095 1184 aa16.39■□□□□ 0.21
DDX23-204ENST00000547290 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
DDX23-204ENST00000547290 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
DDX23-204ENST00000547290 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
DDX23-204ENST00000547290 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
DDX23-204ENST00000547290 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
DDX23-204ENST00000547290 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
DDX23-204ENST00000547290 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
DDX23-204ENST00000547290 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
DDX23-204ENST00000547290 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
DDX23-204ENST00000547290 NUP160Q12769 1436 aa16.28■□□□□ 0.2
DDX23-204ENST00000547290 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
DDX23-204ENST00000547290 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
DDX23-204ENST00000547290 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
DDX23-204ENST00000547290 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
DDX23-204ENST00000547290 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
DDX23-204ENST00000547290 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
DDX23-204ENST00000547290 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
DDX23-204ENST00000547290 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
DDX23-204ENST00000547290 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms