RNA–Protein interactions for RNA: ENST00000547130.5

PFDN5-204, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-204ENST00000547130 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
PFDN5-204ENST00000547130 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
PFDN5-204ENST00000547130 ABCC9O60706 1549 aa26.17■■□□□ 1.78
PFDN5-204ENST00000547130 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
PFDN5-204ENST00000547130 NACADO15069 1562 aa25.01■■□□□ 1.59
PFDN5-204ENST00000547130 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
PFDN5-204ENST00000547130 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
PFDN5-204ENST00000547130 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
PFDN5-204ENST00000547130 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
PFDN5-204ENST00000547130 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
PFDN5-204ENST00000547130 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
PFDN5-204ENST00000547130 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
PFDN5-204ENST00000547130 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
PFDN5-204ENST00000547130 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
PFDN5-204ENST00000547130 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
PFDN5-204ENST00000547130 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
PFDN5-204ENST00000547130 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
PFDN5-204ENST00000547130 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
PFDN5-204ENST00000547130 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
PFDN5-204ENST00000547130 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
PFDN5-204ENST00000547130 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
PFDN5-204ENST00000547130 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
PFDN5-204ENST00000547130 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
PFDN5-204ENST00000547130 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
PFDN5-204ENST00000547130 MROH2BQ7Z745 1585 aa22.94■■□□□ 1.26
PFDN5-204ENST00000547130 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
PFDN5-204ENST00000547130 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
PFDN5-204ENST00000547130 WIZO95785 1651 aa22.75■■□□□ 1.23
PFDN5-204ENST00000547130 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
PFDN5-204ENST00000547130 NESP48681 1621 aa22.57■■□□□ 1.2
PFDN5-204ENST00000547130 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
PFDN5-204ENST00000547130 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
PFDN5-204ENST00000547130 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
PFDN5-204ENST00000547130 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
PFDN5-204ENST00000547130 CUX2O14529 1486 aa22.37■■□□□ 1.17
PFDN5-204ENST00000547130 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
PFDN5-204ENST00000547130 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
PFDN5-204ENST00000547130 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
PFDN5-204ENST00000547130 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
PFDN5-204ENST00000547130 CFTRP13569 1480 aa22.17■■□□□ 1.14
PFDN5-204ENST00000547130 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
PFDN5-204ENST00000547130 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
PFDN5-204ENST00000547130 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
PFDN5-204ENST00000547130 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
PFDN5-204ENST00000547130 WDR62O43379 1518 aa22.09■■□□□ 1.13
PFDN5-204ENST00000547130 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
PFDN5-204ENST00000547130 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
PFDN5-204ENST00000547130 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
PFDN5-204ENST00000547130 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
PFDN5-204ENST00000547130 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
PFDN5-204ENST00000547130 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
PFDN5-204ENST00000547130 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
PFDN5-204ENST00000547130 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
PFDN5-204ENST00000547130 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
PFDN5-204ENST00000547130 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
PFDN5-204ENST00000547130 TARBP1Q13395 1621 aaKnown RBP21.56■■□□□ 1.04
PFDN5-204ENST00000547130 CUX1P39880 1505 aa21.55■■□□□ 1.04
PFDN5-204ENST00000547130 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
PFDN5-204ENST00000547130 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
PFDN5-204ENST00000547130 SOGA1O94964 1423 aa21.44■■□□□ 1.02
PFDN5-204ENST00000547130 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
PFDN5-204ENST00000547130 AQRO60306 1485 aaKnown RBP eCLIP21.41■■□□□ 1.026e-7■■■■■ 32.7
PFDN5-204ENST00000547130 CHD1O14646 1710 aa21.39■■□□□ 1.01
PFDN5-204ENST00000547130 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
PFDN5-204ENST00000547130 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
PFDN5-204ENST00000547130 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
PFDN5-204ENST00000547130 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.013e-8■□□□□ 9.6
PFDN5-204ENST00000547130 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
PFDN5-204ENST00000547130 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
PFDN5-204ENST00000547130 OSCARQ8IYS5 282 aa21.3■■□□□ 1
PFDN5-204ENST00000547130 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
PFDN5-204ENST00000547130 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
PFDN5-204ENST00000547130 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
PFDN5-204ENST00000547130 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
PFDN5-204ENST00000547130 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
PFDN5-204ENST00000547130 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
PFDN5-204ENST00000547130 FBLN2P98095 1184 aa21.21■□□□□ 0.99
PFDN5-204ENST00000547130 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
PFDN5-204ENST00000547130 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
PFDN5-204ENST00000547130 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
PFDN5-204ENST00000547130 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
PFDN5-204ENST00000547130 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
PFDN5-204ENST00000547130 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
PFDN5-204ENST00000547130 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
PFDN5-204ENST00000547130 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
PFDN5-204ENST00000547130 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
PFDN5-204ENST00000547130 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
PFDN5-204ENST00000547130 GRIN2AQ12879 1464 aa21■□□□□ 0.95
PFDN5-204ENST00000547130 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.95
PFDN5-204ENST00000547130 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
PFDN5-204ENST00000547130 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
PFDN5-204ENST00000547130 CUL7Q14999 1698 aa20.89■□□□□ 0.94
PFDN5-204ENST00000547130 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
PFDN5-204ENST00000547130 NUP160Q12769 1436 aa20.86■□□□□ 0.93
PFDN5-204ENST00000547130 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
PFDN5-204ENST00000547130 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
PFDN5-204ENST00000547130 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
PFDN5-204ENST00000547130 ERCC6L2Q5T890 1561 aa20.75■□□□□ 0.91
PFDN5-204ENST00000547130 IGF1RP08069 1367 aa20.72■□□□□ 0.91
PFDN5-204ENST00000547130 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms