RNA–Protein interactions for RNA: ENST00000547113.1

PRICKLE1-204, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-204ENST00000547113 NISCHQ9Y2I1 1504 aa44.16■■■■■ 4.66
PRICKLE1-204ENST00000547113 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
PRICKLE1-204ENST00000547113 ABCC9O60706 1549 aa38.85■■■■□ 3.81
PRICKLE1-204ENST00000547113 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
PRICKLE1-204ENST00000547113 DCAF8L2P0C7V8 631 aa37.2■■■■□ 3.55
PRICKLE1-204ENST00000547113 NACADO15069 1562 aa37.1■■■■□ 3.53
PRICKLE1-204ENST00000547113 MYO15BQ96JP2 1530 aa36.79■■■■□ 3.48
PRICKLE1-204ENST00000547113 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
PRICKLE1-204ENST00000547113 DCAF1Q9Y4B6 1507 aa36.52■■■■□ 3.44
PRICKLE1-204ENST00000547113 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
PRICKLE1-204ENST00000547113 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
PRICKLE1-204ENST00000547113 BICRAQ9NZM4 1560 aa36.03■■■■□ 3.36
PRICKLE1-204ENST00000547113 DNAJC5BQ9UF47 199 aa35.97■■■■□ 3.35
PRICKLE1-204ENST00000547113 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
PRICKLE1-204ENST00000547113 SHROOM4Q9ULL8 1493 aa35.7■■■■□ 3.31
PRICKLE1-204ENST00000547113 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
PRICKLE1-204ENST00000547113 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
PRICKLE1-204ENST00000547113 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
PRICKLE1-204ENST00000547113 NCAPD3P42695 1498 aa34.29■■■■□ 3.08
PRICKLE1-204ENST00000547113 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
PRICKLE1-204ENST00000547113 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
PRICKLE1-204ENST00000547113 ATAD2BQ9ULI0 1458 aa34.25■■■■□ 3.07
PRICKLE1-204ENST00000547113 SMARCA2P51531 1590 aa34.16■■■■□ 3.06
PRICKLE1-204ENST00000547113 HMGXB3Q12766 1538 aa34.02■■■■□ 3.04
PRICKLE1-204ENST00000547113 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
PRICKLE1-204ENST00000547113 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
PRICKLE1-204ENST00000547113 BAZ1BQ9UIG0 1483 aaKnown RBP33.95■■■■□ 3.02
PRICKLE1-204ENST00000547113 WIZO95785 1651 aa33.58■■■□□ 2.97
PRICKLE1-204ENST00000547113 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
PRICKLE1-204ENST00000547113 ERCC6Q03468 1493 aa33.55■■■□□ 2.96
PRICKLE1-204ENST00000547113 NESP48681 1621 aa33.5■■■□□ 2.95
PRICKLE1-204ENST00000547113 LAMC3Q9Y6N6 1575 aa33.37■■■□□ 2.93
PRICKLE1-204ENST00000547113 CADPSQ9ULU8 1353 aa33.31■■■□□ 2.92
PRICKLE1-204ENST00000547113 CUX2O14529 1486 aa33.27■■■□□ 2.92
PRICKLE1-204ENST00000547113 PDS5BQ9NTI5 1447 aa33.26■■■□□ 2.91
PRICKLE1-204ENST00000547113 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
PRICKLE1-204ENST00000547113 CFTRP13569 1480 aa33■■■□□ 2.87
PRICKLE1-204ENST00000547113 KIF21AQ7Z4S6 1674 aa32.98■■■□□ 2.87
PRICKLE1-204ENST00000547113 THOC2Q8NI27 1593 aaKnown RBP32.98■■■□□ 2.87
PRICKLE1-204ENST00000547113 CCDC88BA6NC98 1476 aa32.92■■■□□ 2.86
PRICKLE1-204ENST00000547113 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
PRICKLE1-204ENST00000547113 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
PRICKLE1-204ENST00000547113 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
PRICKLE1-204ENST00000547113 WDR62O43379 1518 aa32.72■■■□□ 2.83
PRICKLE1-204ENST00000547113 DNAJC5Q9H3Z4 198 aa32.68■■■□□ 2.82
PRICKLE1-204ENST00000547113 SUPT5HO00267 1087 aaKnown RBP32.6■■■□□ 2.81
PRICKLE1-204ENST00000547113 URB2Q14146 1524 aaKnown RBP32.52■■■□□ 2.8
PRICKLE1-204ENST00000547113 PRDM2Q13029 1718 aa32.51■■■□□ 2.79
PRICKLE1-204ENST00000547113 ABCC8Q09428 1581 aa32.33■■■□□ 2.77
PRICKLE1-204ENST00000547113 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
PRICKLE1-204ENST00000547113 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.75
PRICKLE1-204ENST00000547113 IFT140Q96RY7 1462 aa32.2■■■□□ 2.75
PRICKLE1-204ENST00000547113 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
PRICKLE1-204ENST00000547113 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.71
PRICKLE1-204ENST00000547113 OSCARQ8IYS5 282 aa31.95■■■□□ 2.71
PRICKLE1-204ENST00000547113 SOGA1O94964 1423 aa31.94■■■□□ 2.7
PRICKLE1-204ENST00000547113 CUX1P39880 1505 aa31.91■■■□□ 2.7
PRICKLE1-204ENST00000547113 TARBP1Q13395 1621 aaKnown RBP31.9■■■□□ 2.7
PRICKLE1-204ENST00000547113 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
PRICKLE1-204ENST00000547113 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
PRICKLE1-204ENST00000547113 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.69
PRICKLE1-204ENST00000547113 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
PRICKLE1-204ENST00000547113 TDRD9Q8NDG6 1382 aaKnown RBP31.8■■■□□ 2.68
PRICKLE1-204ENST00000547113 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.66
PRICKLE1-204ENST00000547113 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
PRICKLE1-204ENST00000547113 FBLN2P98095 1184 aa31.64■■■□□ 2.66
PRICKLE1-204ENST00000547113 GRIN2BQ13224 1484 aa31.58■■■□□ 2.65
PRICKLE1-204ENST00000547113 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
PRICKLE1-204ENST00000547113 TOP2BQ02880 1626 aa31.55■■■□□ 2.64
PRICKLE1-204ENST00000547113 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
PRICKLE1-204ENST00000547113 SNAPC4Q5SXM2 1469 aa31.53■■■□□ 2.64
PRICKLE1-204ENST00000547113 CHMP7Q8WUX9 453 aaPredicted RBP31.51■■■□□ 2.63
PRICKLE1-204ENST00000547113 SYNJ1O43426 1573 aa31.51■■■□□ 2.63
PRICKLE1-204ENST00000547113 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
PRICKLE1-204ENST00000547113 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
PRICKLE1-204ENST00000547113 MAGI1Q96QZ7 1491 aaPredicted RBP31.49■■■□□ 2.63
PRICKLE1-204ENST00000547113 CHD1O14646 1710 aa31.43■■■□□ 2.62
PRICKLE1-204ENST00000547113 SYNJ2O15056 1496 aa31.39■■■□□ 2.62
PRICKLE1-204ENST00000547113 ABCA5Q8WWZ7 1642 aa31.38■■■□□ 2.61
PRICKLE1-204ENST00000547113 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
PRICKLE1-204ENST00000547113 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
PRICKLE1-204ENST00000547113 RIMBP3CA6NJZ7 1639 aa31.27■■■□□ 2.6
PRICKLE1-204ENST00000547113 RIMBP3BA6NNM3 1639 aa31.27■■■□□ 2.6
PRICKLE1-204ENST00000547113 RIMBP3Q9UFD9 1639 aa31.27■■■□□ 2.6
PRICKLE1-204ENST00000547113 ERICH3Q5RHP9 1530 aa31.18■■■□□ 2.58
PRICKLE1-204ENST00000547113 FHAD1B1AJZ9 1412 aa31.17■■■□□ 2.58
PRICKLE1-204ENST00000547113 CLASP1Q7Z460 1538 aa31.17■■■□□ 2.58
PRICKLE1-204ENST00000547113 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
PRICKLE1-204ENST00000547113 GRIN2AQ12879 1464 aa31.13■■■□□ 2.57
PRICKLE1-204ENST00000547113 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
PRICKLE1-204ENST00000547113 KIF27Q86VH2 1401 aa31.07■■■□□ 2.56
PRICKLE1-204ENST00000547113 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
PRICKLE1-204ENST00000547113 NUP160Q12769 1436 aa31.01■■■□□ 2.55
PRICKLE1-204ENST00000547113 IGF1RP08069 1367 aa30.99■■■□□ 2.55
PRICKLE1-204ENST00000547113 CEP170Q5SW79 1584 aa30.93■■■□□ 2.54
PRICKLE1-204ENST00000547113 CARMIL1Q5VZK9 1371 aa30.8■■■□□ 2.52
PRICKLE1-204ENST00000547113 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
PRICKLE1-204ENST00000547113 CUL7Q14999 1698 aa30.78■■■□□ 2.52
PRICKLE1-204ENST00000547113 SHROOM2Q13796 1616 aa30.72■■■□□ 2.51
PRICKLE1-204ENST00000547113 PRG4Q92954 1404 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms