RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
LETMD1-205ENST00000546992 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
LETMD1-205ENST00000546992 ABCC9O60706 1549 aa33.11■■■□□ 2.89
LETMD1-205ENST00000546992 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
LETMD1-205ENST00000546992 DCAF1Q9Y4B6 1507 aa32.24■■■□□ 2.75
LETMD1-205ENST00000546992 NACADO15069 1562 aa32.16■■■□□ 2.74
LETMD1-205ENST00000546992 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
LETMD1-205ENST00000546992 MYO15BQ96JP2 1530 aa32.14■■■□□ 2.74
LETMD1-205ENST00000546992 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
LETMD1-205ENST00000546992 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
LETMD1-205ENST00000546992 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
LETMD1-205ENST00000546992 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
LETMD1-205ENST00000546992 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
LETMD1-205ENST00000546992 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
LETMD1-205ENST00000546992 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
LETMD1-205ENST00000546992 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
LETMD1-205ENST00000546992 SMARCA4P51532 1647 aa30.16■■■□□ 2.42
LETMD1-205ENST00000546992 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
LETMD1-205ENST00000546992 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
LETMD1-205ENST00000546992 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
LETMD1-205ENST00000546992 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
LETMD1-205ENST00000546992 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
LETMD1-205ENST00000546992 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
LETMD1-205ENST00000546992 WIZO95785 1651 aa29.82■■■□□ 2.36
LETMD1-205ENST00000546992 ATAD2BQ9ULI0 1458 aa29.79■■■□□ 2.36
LETMD1-205ENST00000546992 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
LETMD1-205ENST00000546992 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
LETMD1-205ENST00000546992 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
LETMD1-205ENST00000546992 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
LETMD1-205ENST00000546992 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
LETMD1-205ENST00000546992 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
LETMD1-205ENST00000546992 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
LETMD1-205ENST00000546992 NESP48681 1621 aa28.87■■■□□ 2.21
LETMD1-205ENST00000546992 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
LETMD1-205ENST00000546992 CFTRP13569 1480 aa28.78■■■□□ 2.2
LETMD1-205ENST00000546992 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
LETMD1-205ENST00000546992 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
LETMD1-205ENST00000546992 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
LETMD1-205ENST00000546992 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
LETMD1-205ENST00000546992 PDS5BQ9NTI5 1447 aa28.5■■■□□ 2.15
LETMD1-205ENST00000546992 CEP164Q9UPV0 1460 aa28.41■■■□□ 2.14
LETMD1-205ENST00000546992 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
LETMD1-205ENST00000546992 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
LETMD1-205ENST00000546992 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
LETMD1-205ENST00000546992 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
LETMD1-205ENST00000546992 URB2Q14146 1524 aaKnown RBP28.26■■■□□ 2.11
LETMD1-205ENST00000546992 WDR62O43379 1518 aa28.2■■■□□ 2.1
LETMD1-205ENST00000546992 CUX1P39880 1505 aa28.19■■■□□ 2.1
LETMD1-205ENST00000546992 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
LETMD1-205ENST00000546992 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
LETMD1-205ENST00000546992 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
LETMD1-205ENST00000546992 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
LETMD1-205ENST00000546992 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
LETMD1-205ENST00000546992 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
LETMD1-205ENST00000546992 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
LETMD1-205ENST00000546992 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
LETMD1-205ENST00000546992 CUX2O14529 1486 aa27.93■■■□□ 2.06
LETMD1-205ENST00000546992 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
LETMD1-205ENST00000546992 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
LETMD1-205ENST00000546992 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
LETMD1-205ENST00000546992 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.04
LETMD1-205ENST00000546992 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
LETMD1-205ENST00000546992 SOGA1O94964 1423 aa27.75■■■□□ 2.03
LETMD1-205ENST00000546992 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
LETMD1-205ENST00000546992 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
LETMD1-205ENST00000546992 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
LETMD1-205ENST00000546992 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
LETMD1-205ENST00000546992 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
LETMD1-205ENST00000546992 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
LETMD1-205ENST00000546992 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 29e-11■□□□□ 10.1
LETMD1-205ENST00000546992 PBRM1Q86U86 1689 aa27.53■■■□□ 2
LETMD1-205ENST00000546992 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
LETMD1-205ENST00000546992 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
LETMD1-205ENST00000546992 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
LETMD1-205ENST00000546992 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
LETMD1-205ENST00000546992 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
LETMD1-205ENST00000546992 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
LETMD1-205ENST00000546992 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
LETMD1-205ENST00000546992 IGF1RP08069 1367 aa27.3■■□□□ 1.96
LETMD1-205ENST00000546992 EEA1Q15075 1411 aa27.27■■□□□ 1.96
LETMD1-205ENST00000546992 CUL7Q14999 1698 aa27.27■■□□□ 1.96
LETMD1-205ENST00000546992 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
LETMD1-205ENST00000546992 CHD1O14646 1710 aa27.23■■□□□ 1.95
LETMD1-205ENST00000546992 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
LETMD1-205ENST00000546992 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
LETMD1-205ENST00000546992 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
LETMD1-205ENST00000546992 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
LETMD1-205ENST00000546992 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
LETMD1-205ENST00000546992 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
LETMD1-205ENST00000546992 KIF21BO75037 1637 aa27.08■■□□□ 1.93
LETMD1-205ENST00000546992 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
LETMD1-205ENST00000546992 RAPGEF2Q9Y4G8 1499 aa27.05■■□□□ 1.92
LETMD1-205ENST00000546992 CEP170Q5SW79 1584 aa27■■□□□ 1.91
LETMD1-205ENST00000546992 CHMP7Q8WUX9 453 aaPredicted RBP26.99■■□□□ 1.91
LETMD1-205ENST00000546992 FBLN2P98095 1184 aa26.98■■□□□ 1.91
LETMD1-205ENST00000546992 NUP160Q12769 1436 aa26.94■■□□□ 1.9
LETMD1-205ENST00000546992 CTTNBP2Q8WZ74 1663 aa26.92■■□□□ 1.9
LETMD1-205ENST00000546992 GOLGA3Q08378 1498 aa26.9■■□□□ 1.9
LETMD1-205ENST00000546992 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
LETMD1-205ENST00000546992 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms