RNA–Protein interactions for RNA: ENST00000546786.5

RACGAP1-207, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-207ENST00000546786 NISCHQ9Y2I1 1504 aa40.82■■■■■ 4.12
RACGAP1-207ENST00000546786 CCDC180Q9P1Z9 1646 aa36.33■■■■□ 3.41
RACGAP1-207ENST00000546786 ABCC9O60706 1549 aa36.04■■■■□ 3.36
RACGAP1-207ENST00000546786 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
RACGAP1-207ENST00000546786 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
RACGAP1-207ENST00000546786 NACADO15069 1562 aa34.28■■■■□ 3.08
RACGAP1-207ENST00000546786 MYO15BQ96JP2 1530 aa33.95■■■■□ 3.03
RACGAP1-207ENST00000546786 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
RACGAP1-207ENST00000546786 PABPN1Q86U42 306 aaKnown RBP eCLIP33.69■■■□□ 2.98
RACGAP1-207ENST00000546786 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
RACGAP1-207ENST00000546786 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
RACGAP1-207ENST00000546786 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
RACGAP1-207ENST00000546786 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
RACGAP1-207ENST00000546786 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
RACGAP1-207ENST00000546786 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
RACGAP1-207ENST00000546786 EIF4G1Q04637 1599 aaKnown RBP32.58■■■□□ 2.81
RACGAP1-207ENST00000546786 CC2D2AQ9P2K1 1620 aa32.54■■■□□ 2.8
RACGAP1-207ENST00000546786 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
RACGAP1-207ENST00000546786 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
RACGAP1-207ENST00000546786 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
RACGAP1-207ENST00000546786 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
RACGAP1-207ENST00000546786 BAZ1AQ9NRL2 1556 aaPredicted RBP31.59■■■□□ 2.65
RACGAP1-207ENST00000546786 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
RACGAP1-207ENST00000546786 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
RACGAP1-207ENST00000546786 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
RACGAP1-207ENST00000546786 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
RACGAP1-207ENST00000546786 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
RACGAP1-207ENST00000546786 NESP48681 1621 aa31.11■■■□□ 2.57
RACGAP1-207ENST00000546786 WIZO95785 1651 aa31.1■■■□□ 2.57
RACGAP1-207ENST00000546786 ERCC6Q03468 1493 aa31.01■■■□□ 2.55
RACGAP1-207ENST00000546786 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
RACGAP1-207ENST00000546786 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
RACGAP1-207ENST00000546786 CUX2O14529 1486 aa30.8■■■□□ 2.52
RACGAP1-207ENST00000546786 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
RACGAP1-207ENST00000546786 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
RACGAP1-207ENST00000546786 PDS5BQ9NTI5 1447 aa30.68■■■□□ 2.5
RACGAP1-207ENST00000546786 KIF21AQ7Z4S6 1674 aa30.64■■■□□ 2.5
RACGAP1-207ENST00000546786 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
RACGAP1-207ENST00000546786 CFTRP13569 1480 aa30.5■■■□□ 2.47
RACGAP1-207ENST00000546786 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
RACGAP1-207ENST00000546786 MRC2Q9UBG0 1479 aa30.4■■■□□ 2.46
RACGAP1-207ENST00000546786 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
RACGAP1-207ENST00000546786 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
RACGAP1-207ENST00000546786 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
RACGAP1-207ENST00000546786 WDR62O43379 1518 aa30.32■■■□□ 2.44
RACGAP1-207ENST00000546786 URB2Q14146 1524 aaKnown RBP30.15■■■□□ 2.42
RACGAP1-207ENST00000546786 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
RACGAP1-207ENST00000546786 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
RACGAP1-207ENST00000546786 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
RACGAP1-207ENST00000546786 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
RACGAP1-207ENST00000546786 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
RACGAP1-207ENST00000546786 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
RACGAP1-207ENST00000546786 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
RACGAP1-207ENST00000546786 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
RACGAP1-207ENST00000546786 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
RACGAP1-207ENST00000546786 CUX1P39880 1505 aa29.55■■■□□ 2.32
RACGAP1-207ENST00000546786 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
RACGAP1-207ENST00000546786 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
RACGAP1-207ENST00000546786 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.321e-6■■■□□ 14.8
RACGAP1-207ENST00000546786 EIF4G3O43432 1585 aaKnown RBP29.5■■■□□ 2.31
RACGAP1-207ENST00000546786 SOGA1O94964 1423 aa29.49■■■□□ 2.31
RACGAP1-207ENST00000546786 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
RACGAP1-207ENST00000546786 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
RACGAP1-207ENST00000546786 TRIM41Q8WV44 630 aa29.24■■■□□ 2.27
RACGAP1-207ENST00000546786 FBLN2P98095 1184 aa29.21■■■□□ 2.27
RACGAP1-207ENST00000546786 CHD1O14646 1710 aa29.2■■■□□ 2.26
RACGAP1-207ENST00000546786 WDR97A6NE52 1622 aa29.2■■■□□ 2.26
RACGAP1-207ENST00000546786 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
RACGAP1-207ENST00000546786 SNAPC4Q5SXM2 1469 aa29.18■■■□□ 2.26
RACGAP1-207ENST00000546786 ABCA10Q8WWZ4 1543 aa29.16■■■□□ 2.26
RACGAP1-207ENST00000546786 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
RACGAP1-207ENST00000546786 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
RACGAP1-207ENST00000546786 TOP2BQ02880 1626 aa29.13■■■□□ 2.25
RACGAP1-207ENST00000546786 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
RACGAP1-207ENST00000546786 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
RACGAP1-207ENST00000546786 MAGI1Q96QZ7 1491 aaPredicted RBP29.08■■■□□ 2.25
RACGAP1-207ENST00000546786 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
RACGAP1-207ENST00000546786 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
RACGAP1-207ENST00000546786 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
RACGAP1-207ENST00000546786 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
RACGAP1-207ENST00000546786 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
RACGAP1-207ENST00000546786 ARHGEF11O15085 1522 aa29.03■■■□□ 2.24
RACGAP1-207ENST00000546786 PBRM1Q86U86 1689 aa29.01■■■□□ 2.23
RACGAP1-207ENST00000546786 SYNJ2O15056 1496 aa28.99■■■□□ 2.23
RACGAP1-207ENST00000546786 CLASP1Q7Z460 1538 aa28.91■■■□□ 2.22
RACGAP1-207ENST00000546786 CYB5RLQ6IPT4 315 aa28.86■■■□□ 2.21
RACGAP1-207ENST00000546786 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
RACGAP1-207ENST00000546786 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
RACGAP1-207ENST00000546786 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
RACGAP1-207ENST00000546786 ERICH3Q5RHP9 1530 aa28.77■■■□□ 2.2
RACGAP1-207ENST00000546786 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
RACGAP1-207ENST00000546786 NUP160Q12769 1436 aa28.69■■■□□ 2.18
RACGAP1-207ENST00000546786 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
RACGAP1-207ENST00000546786 IGF1RP08069 1367 aa28.61■■■□□ 2.17
RACGAP1-207ENST00000546786 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
RACGAP1-207ENST00000546786 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
RACGAP1-207ENST00000546786 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
RACGAP1-207ENST00000546786 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
RACGAP1-207ENST00000546786 CUL7Q14999 1698 aa28.39■■■□□ 2.14
RACGAP1-207ENST00000546786 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms