RNA–Protein interactions for RNA: ENST00000546781.5

TPCN1-206, Transcript of two pore segment channel 1, humanhuman

TSL 3

Gene TPCN1, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-206ENST00000546781 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
TPCN1-206ENST00000546781 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
TPCN1-206ENST00000546781 ABCC9O60706 1549 aa24.15■■□□□ 1.46
TPCN1-206ENST00000546781 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
TPCN1-206ENST00000546781 NACADO15069 1562 aa23.06■■□□□ 1.28
TPCN1-206ENST00000546781 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
TPCN1-206ENST00000546781 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
TPCN1-206ENST00000546781 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
TPCN1-206ENST00000546781 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
TPCN1-206ENST00000546781 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
TPCN1-206ENST00000546781 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
TPCN1-206ENST00000546781 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
TPCN1-206ENST00000546781 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
TPCN1-206ENST00000546781 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
TPCN1-206ENST00000546781 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
TPCN1-206ENST00000546781 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
TPCN1-206ENST00000546781 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
TPCN1-206ENST00000546781 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
TPCN1-206ENST00000546781 SMARCA4P51532 1647 aa21.29■■□□□ 1
TPCN1-206ENST00000546781 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
TPCN1-206ENST00000546781 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
TPCN1-206ENST00000546781 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
TPCN1-206ENST00000546781 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
TPCN1-206ENST00000546781 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
TPCN1-206ENST00000546781 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
TPCN1-206ENST00000546781 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.95
TPCN1-206ENST00000546781 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
TPCN1-206ENST00000546781 CUX2O14529 1486 aa20.83■□□□□ 0.93
TPCN1-206ENST00000546781 ERCC6Q03468 1493 aa20.83■□□□□ 0.93
TPCN1-206ENST00000546781 NESP48681 1621 aa20.83■□□□□ 0.93
TPCN1-206ENST00000546781 WIZO95785 1651 aa20.78■□□□□ 0.92
TPCN1-206ENST00000546781 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
TPCN1-206ENST00000546781 THOC2Q8NI27 1593 aaKnown RBP20.7■□□□□ 0.9
TPCN1-206ENST00000546781 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
TPCN1-206ENST00000546781 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
TPCN1-206ENST00000546781 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
TPCN1-206ENST00000546781 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
TPCN1-206ENST00000546781 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
TPCN1-206ENST00000546781 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
TPCN1-206ENST00000546781 CFTRP13569 1480 aa20.43■□□□□ 0.86
TPCN1-206ENST00000546781 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
TPCN1-206ENST00000546781 WDR62O43379 1518 aa20.43■□□□□ 0.86
TPCN1-206ENST00000546781 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
TPCN1-206ENST00000546781 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
TPCN1-206ENST00000546781 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
TPCN1-206ENST00000546781 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
TPCN1-206ENST00000546781 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
TPCN1-206ENST00000546781 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
TPCN1-206ENST00000546781 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
TPCN1-206ENST00000546781 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
TPCN1-206ENST00000546781 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
TPCN1-206ENST00000546781 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
TPCN1-206ENST00000546781 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
TPCN1-206ENST00000546781 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
TPCN1-206ENST00000546781 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
TPCN1-206ENST00000546781 CUX1P39880 1505 aa19.76■□□□□ 0.75
TPCN1-206ENST00000546781 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
TPCN1-206ENST00000546781 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
TPCN1-206ENST00000546781 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
TPCN1-206ENST00000546781 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.746e-8■■■■■ 35.2
TPCN1-206ENST00000546781 CHD1O14646 1710 aa19.7■□□□□ 0.74
TPCN1-206ENST00000546781 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
TPCN1-206ENST00000546781 SOGA1O94964 1423 aa19.66■□□□□ 0.74
TPCN1-206ENST00000546781 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
TPCN1-206ENST00000546781 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
TPCN1-206ENST00000546781 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
TPCN1-206ENST00000546781 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
TPCN1-206ENST00000546781 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
TPCN1-206ENST00000546781 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
TPCN1-206ENST00000546781 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
TPCN1-206ENST00000546781 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
TPCN1-206ENST00000546781 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
TPCN1-206ENST00000546781 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
TPCN1-206ENST00000546781 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
TPCN1-206ENST00000546781 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
TPCN1-206ENST00000546781 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
TPCN1-206ENST00000546781 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
TPCN1-206ENST00000546781 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
TPCN1-206ENST00000546781 CLASP1Q7Z460 1538 aa19.49■□□□□ 0.71
TPCN1-206ENST00000546781 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
TPCN1-206ENST00000546781 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
TPCN1-206ENST00000546781 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
TPCN1-206ENST00000546781 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
TPCN1-206ENST00000546781 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
TPCN1-206ENST00000546781 FBLN2P98095 1184 aa19.39■□□□□ 0.69
TPCN1-206ENST00000546781 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
TPCN1-206ENST00000546781 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
TPCN1-206ENST00000546781 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
TPCN1-206ENST00000546781 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
TPCN1-206ENST00000546781 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
TPCN1-206ENST00000546781 NUP160Q12769 1436 aa19.25■□□□□ 0.67
TPCN1-206ENST00000546781 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
TPCN1-206ENST00000546781 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
TPCN1-206ENST00000546781 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
TPCN1-206ENST00000546781 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
TPCN1-206ENST00000546781 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
TPCN1-206ENST00000546781 CUL7Q14999 1698 aa19.08■□□□□ 0.65
TPCN1-206ENST00000546781 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
TPCN1-206ENST00000546781 IGF1RP08069 1367 aa19.01■□□□□ 0.63
TPCN1-206ENST00000546781 PRG4Q92954 1404 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms