RNA–Protein interactions for RNA: ENST00000546768.1

APPL2-204, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, humanhuman

TSL 3

Gene APPL2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL2-204ENST00000546768 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
APPL2-204ENST00000546768 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
APPL2-204ENST00000546768 ABCC9O60706 1549 aa19.46■□□□□ 0.71
APPL2-204ENST00000546768 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
APPL2-204ENST00000546768 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
APPL2-204ENST00000546768 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
APPL2-204ENST00000546768 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
APPL2-204ENST00000546768 NACADO15069 1562 aa18.95■□□□□ 0.62
APPL2-204ENST00000546768 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
APPL2-204ENST00000546768 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
APPL2-204ENST00000546768 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
APPL2-204ENST00000546768 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
APPL2-204ENST00000546768 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
APPL2-204ENST00000546768 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
APPL2-204ENST00000546768 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
APPL2-204ENST00000546768 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
APPL2-204ENST00000546768 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
APPL2-204ENST00000546768 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
APPL2-204ENST00000546768 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
APPL2-204ENST00000546768 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
APPL2-204ENST00000546768 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
APPL2-204ENST00000546768 WIZO95785 1651 aa17.65■□□□□ 0.42
APPL2-204ENST00000546768 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
APPL2-204ENST00000546768 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
APPL2-204ENST00000546768 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
APPL2-204ENST00000546768 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
APPL2-204ENST00000546768 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
APPL2-204ENST00000546768 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
APPL2-204ENST00000546768 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
APPL2-204ENST00000546768 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
APPL2-204ENST00000546768 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
APPL2-204ENST00000546768 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
APPL2-204ENST00000546768 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
APPL2-204ENST00000546768 CFTRP13569 1480 aa17.03■□□□□ 0.32
APPL2-204ENST00000546768 NESP48681 1621 aa16.99■□□□□ 0.31
APPL2-204ENST00000546768 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
APPL2-204ENST00000546768 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
APPL2-204ENST00000546768 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
APPL2-204ENST00000546768 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
APPL2-204ENST00000546768 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
APPL2-204ENST00000546768 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
APPL2-204ENST00000546768 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
APPL2-204ENST00000546768 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
APPL2-204ENST00000546768 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
APPL2-204ENST00000546768 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
APPL2-204ENST00000546768 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
APPL2-204ENST00000546768 CUX1P39880 1505 aa16.68■□□□□ 0.26
APPL2-204ENST00000546768 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
APPL2-204ENST00000546768 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
APPL2-204ENST00000546768 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
APPL2-204ENST00000546768 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
APPL2-204ENST00000546768 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
APPL2-204ENST00000546768 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
APPL2-204ENST00000546768 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
APPL2-204ENST00000546768 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
APPL2-204ENST00000546768 THOC2Q8NI27 1593 aaKnown RBP16.53■□□□□ 0.24
APPL2-204ENST00000546768 WDR62O43379 1518 aa16.53■□□□□ 0.24
APPL2-204ENST00000546768 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
APPL2-204ENST00000546768 SOGA1O94964 1423 aa16.5■□□□□ 0.23
APPL2-204ENST00000546768 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
APPL2-204ENST00000546768 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
APPL2-204ENST00000546768 CUX2O14529 1486 aa16.45■□□□□ 0.22
APPL2-204ENST00000546768 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
APPL2-204ENST00000546768 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
APPL2-204ENST00000546768 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
APPL2-204ENST00000546768 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
APPL2-204ENST00000546768 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
APPL2-204ENST00000546768 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
APPL2-204ENST00000546768 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
APPL2-204ENST00000546768 EEA1Q15075 1411 aa16.35■□□□□ 0.21
APPL2-204ENST00000546768 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
APPL2-204ENST00000546768 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
APPL2-204ENST00000546768 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
APPL2-204ENST00000546768 IGF1RP08069 1367 aa16.31■□□□□ 0.2
APPL2-204ENST00000546768 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
APPL2-204ENST00000546768 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
APPL2-204ENST00000546768 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
APPL2-204ENST00000546768 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
APPL2-204ENST00000546768 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
APPL2-204ENST00000546768 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
APPL2-204ENST00000546768 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
APPL2-204ENST00000546768 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
APPL2-204ENST00000546768 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
APPL2-204ENST00000546768 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
APPL2-204ENST00000546768 KIF21BO75037 1637 aa16.12■□□□□ 0.17
APPL2-204ENST00000546768 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
APPL2-204ENST00000546768 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
APPL2-204ENST00000546768 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
APPL2-204ENST00000546768 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
APPL2-204ENST00000546768 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
APPL2-204ENST00000546768 CUL7Q14999 1698 aa16.1■□□□□ 0.17
APPL2-204ENST00000546768 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
APPL2-204ENST00000546768 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
APPL2-204ENST00000546768 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
APPL2-204ENST00000546768 FBLN2P98095 1184 aa16.06■□□□□ 0.16
APPL2-204ENST00000546768 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
APPL2-204ENST00000546768 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
APPL2-204ENST00000546768 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
APPL2-204ENST00000546768 RANGAP1P46060 587 aaPredicted RBP15.94■□□□□ 0.14
APPL2-204ENST00000546768 CHD1O14646 1710 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms