RNA–Protein interactions for RNA: ENST00000546764.5

RACGAP1-206, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-206ENST00000546764 NISCHQ9Y2I1 1504 aa54.52■■■■■ 6.32
RACGAP1-206ENST00000546764 CCDC180Q9P1Z9 1646 aa48.87■■■■■ 5.41
RACGAP1-206ENST00000546764 ABCC9O60706 1549 aa48.22■■■■■ 5.31
RACGAP1-206ENST00000546764 RB1CC1Q8TDY2 1594 aa46.21■■■■■ 4.99
RACGAP1-206ENST00000546764 NACADO15069 1562 aa45.99■■■■■ 4.95
RACGAP1-206ENST00000546764 DCAF8L2P0C7V8 631 aa45.74■■■■■ 4.91
RACGAP1-206ENST00000546764 MYO15BQ96JP2 1530 aa45.49■■■■■ 4.87
RACGAP1-206ENST00000546764 UNC13AQ9UPW8 1703 aa45.31■■■■■ 4.84
RACGAP1-206ENST00000546764 ZCCHC6Q5VYS8 1495 aaKnown RBP45.29■■■■■ 4.84
RACGAP1-206ENST00000546764 DCAF1Q9Y4B6 1507 aa45.09■■■■■ 4.81
RACGAP1-206ENST00000546764 PABPN1Q86U42 306 aaKnown RBP eCLIP44.9■■■■■ 4.78
RACGAP1-206ENST00000546764 BICRAQ9NZM4 1560 aa44.8■■■■■ 4.76
RACGAP1-206ENST00000546764 DNAJC5BQ9UF47 199 aa44.69■■■■■ 4.74
RACGAP1-206ENST00000546764 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
RACGAP1-206ENST00000546764 SHROOM4Q9ULL8 1493 aa44.27■■■■■ 4.68
RACGAP1-206ENST00000546764 EIF4G1Q04637 1599 aaKnown RBP43.67■■■■■ 4.58
RACGAP1-206ENST00000546764 CC2D2AQ9P2K1 1620 aa43.66■■■■■ 4.58
RACGAP1-206ENST00000546764 CECR2Q9BXF3 1484 aa43.39■■■■■ 4.54
RACGAP1-206ENST00000546764 SMARCA4P51532 1647 aa42.49■■■■■ 4.39
RACGAP1-206ENST00000546764 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
RACGAP1-206ENST00000546764 BAZ1AQ9NRL2 1556 aaPredicted RBP42.33■■■■■ 4.37
RACGAP1-206ENST00000546764 ATAD2BQ9ULI0 1458 aa42.32■■■■■ 4.37
RACGAP1-206ENST00000546764 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
RACGAP1-206ENST00000546764 HMGXB3Q12766 1538 aa42.19■■■■■ 4.34
RACGAP1-206ENST00000546764 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
RACGAP1-206ENST00000546764 MROH2BQ7Z745 1585 aa42.01■■■■■ 4.32
RACGAP1-206ENST00000546764 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
RACGAP1-206ENST00000546764 ERCC6Q03468 1493 aa41.64■■■■■ 4.26
RACGAP1-206ENST00000546764 WIZO95785 1651 aa41.61■■■■■ 4.25
RACGAP1-206ENST00000546764 NESP48681 1621 aa41.57■■■■■ 4.25
RACGAP1-206ENST00000546764 LAMC3Q9Y6N6 1575 aa41.44■■■■■ 4.22
RACGAP1-206ENST00000546764 CUX2O14529 1486 aa41.4■■■■■ 4.22
RACGAP1-206ENST00000546764 RSF1Q96T23 1441 aaPredicted RBP41.27■■■■■ 4.2
RACGAP1-206ENST00000546764 KIF21AQ7Z4S6 1674 aa41.2■■■■■ 4.19
RACGAP1-206ENST00000546764 THOC2Q8NI27 1593 aaKnown RBP41.13■■■■■ 4.18
RACGAP1-206ENST00000546764 PDS5BQ9NTI5 1447 aa41.1■■■■■ 4.17
RACGAP1-206ENST00000546764 CADPSQ9ULU8 1353 aa41.1■■■■■ 4.17
RACGAP1-206ENST00000546764 TOP2AP11388 1531 aaKnown RBP41.08■■■■■ 4.17
RACGAP1-206ENST00000546764 CFTRP13569 1480 aa40.75■■■■■ 4.11
RACGAP1-206ENST00000546764 MRC2Q9UBG0 1479 aa40.75■■■■■ 4.11
RACGAP1-206ENST00000546764 DNAJC5Q9H3Z4 198 aa40.72■■■■■ 4.11
RACGAP1-206ENST00000546764 CEP164Q9UPV0 1460 aa40.7■■■■■ 4.11
RACGAP1-206ENST00000546764 FANCD2Q9BXW9 1451 aa40.67■■■■■ 4.1
RACGAP1-206ENST00000546764 PRDM2Q13029 1718 aa40.67■■■■■ 4.1
RACGAP1-206ENST00000546764 WDR62O43379 1518 aa40.65■■■■■ 4.1
RACGAP1-206ENST00000546764 CCDC88BA6NC98 1476 aa40.55■■■■■ 4.08
RACGAP1-206ENST00000546764 URB2Q14146 1524 aaKnown RBP40.3■■■■■ 4.04
RACGAP1-206ENST00000546764 TOPBP1Q92547 1522 aa39.97■■■■□ 3.99
RACGAP1-206ENST00000546764 ABCC8Q09428 1581 aa39.94■■■■□ 3.98
RACGAP1-206ENST00000546764 DNMBPQ6XZF7 1577 aa39.91■■■■□ 3.98
RACGAP1-206ENST00000546764 IFT140Q96RY7 1462 aa39.84■■■■□ 3.97
RACGAP1-206ENST00000546764 SUPT5HO00267 1087 aaKnown RBP39.8■■■■□ 3.96
RACGAP1-206ENST00000546764 ZNF608Q9ULD9 1512 aaPredicted RBP39.7■■■■□ 3.95
RACGAP1-206ENST00000546764 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
RACGAP1-206ENST00000546764 TARBP1Q13395 1621 aaKnown RBP39.62■■■■□ 3.93
RACGAP1-206ENST00000546764 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
RACGAP1-206ENST00000546764 OSCARQ8IYS5 282 aa39.52■■■■□ 3.92
RACGAP1-206ENST00000546764 CUX1P39880 1505 aa39.45■■■■□ 3.91
RACGAP1-206ENST00000546764 FGD5Q6ZNL6 1462 aa39.41■■■■□ 3.9
RACGAP1-206ENST00000546764 AQRO60306 1485 aaKnown RBP eCLIP39.39■■■■□ 3.9
RACGAP1-206ENST00000546764 RAD54L2Q9Y4B4 1467 aa39.39■■■■□ 3.9
RACGAP1-206ENST00000546764 SOGA1O94964 1423 aa39.38■■■■□ 3.89
RACGAP1-206ENST00000546764 CHD1O14646 1710 aa39.31■■■■□ 3.88
RACGAP1-206ENST00000546764 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
RACGAP1-206ENST00000546764 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
RACGAP1-206ENST00000546764 TRIM41Q8WV44 630 aa39.17■■■■□ 3.86
RACGAP1-206ENST00000546764 RIMBP3CA6NJZ7 1639 aa39.07■■■■□ 3.85
RACGAP1-206ENST00000546764 RIMBP3BA6NNM3 1639 aa39.07■■■■□ 3.85
RACGAP1-206ENST00000546764 RIMBP3Q9UFD9 1639 aa39.07■■■■□ 3.85
RACGAP1-206ENST00000546764 PBRM1Q86U86 1689 aa39.06■■■■□ 3.84
RACGAP1-206ENST00000546764 BIVM-ERCC5R4GMW8 1640 aa39.05■■■■□ 3.84
RACGAP1-206ENST00000546764 SNAPC4Q5SXM2 1469 aa39.05■■■■□ 3.84
RACGAP1-206ENST00000546764 FBLN2P98095 1184 aa39.04■■■■□ 3.84
RACGAP1-206ENST00000546764 GRIN2BQ13224 1484 aa39.02■■■■□ 3.84
RACGAP1-206ENST00000546764 TOP2BQ02880 1626 aa39■■■■□ 3.83
RACGAP1-206ENST00000546764 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
RACGAP1-206ENST00000546764 MAGI1Q96QZ7 1491 aaPredicted RBP38.99■■■■□ 3.83
RACGAP1-206ENST00000546764 WRNQ14191 1432 aaPredicted RBP eCLIP38.97■■■■□ 3.83
RACGAP1-206ENST00000546764 SYNJ1O43426 1573 aa38.95■■■■□ 3.83
RACGAP1-206ENST00000546764 ARHGEF11O15085 1522 aa38.95■■■■□ 3.83
RACGAP1-206ENST00000546764 ABCA5Q8WWZ7 1642 aa38.95■■■■□ 3.83
RACGAP1-206ENST00000546764 GAPVD1Q14C86 1478 aa38.94■■■■□ 3.82
RACGAP1-206ENST00000546764 CHMP7Q8WUX9 453 aaPredicted RBP38.83■■■■□ 3.81
RACGAP1-206ENST00000546764 SYNJ2O15056 1496 aa38.83■■■■□ 3.81
RACGAP1-206ENST00000546764 CLASP1Q7Z460 1538 aa38.74■■■■□ 3.79
RACGAP1-206ENST00000546764 ADAMTS12P58397 1594 aa38.61■■■■□ 3.77
RACGAP1-206ENST00000546764 ARAP1Q96P48 1450 aa38.58■■■■□ 3.77
RACGAP1-206ENST00000546764 CYB5RLQ6IPT4 315 aa38.55■■■■□ 3.76
RACGAP1-206ENST00000546764 ERICH3Q5RHP9 1530 aa38.54■■■■□ 3.76
RACGAP1-206ENST00000546764 GRIN2AQ12879 1464 aa38.52■■■■□ 3.76
RACGAP1-206ENST00000546764 FHAD1B1AJZ9 1412 aa38.46■■■■□ 3.75
RACGAP1-206ENST00000546764 CEP170Q5SW79 1584 aa38.38■■■■□ 3.73
RACGAP1-206ENST00000546764 NUP160Q12769 1436 aa38.35■■■■□ 3.73
RACGAP1-206ENST00000546764 SHROOM2Q13796 1616 aa38.22■■■■□ 3.71
RACGAP1-206ENST00000546764 KIF27Q86VH2 1401 aa38.2■■■■□ 3.71
RACGAP1-206ENST00000546764 CUL7Q14999 1698 aa38.16■■■■□ 3.7
RACGAP1-206ENST00000546764 ERCC6L2Q5T890 1561 aa38.15■■■■□ 3.7
RACGAP1-206ENST00000546764 RUSC2Q8N2Y8 1516 aa38.07■■■■□ 3.68
RACGAP1-206ENST00000546764 IGF1RP08069 1367 aa38.06■■■■□ 3.68
RACGAP1-206ENST00000546764 TRHP20396 242 aaPredicted RBP38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms