RNA–Protein interactions for RNA: ENST00000546741.2

PKP2-204, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-204ENST00000546741 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
PKP2-204ENST00000546741 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
PKP2-204ENST00000546741 AEBP2Q6ZN18 517 aaPredicted RBP28.6■■■□□ 2.17
PKP2-204ENST00000546741 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
PKP2-204ENST00000546741 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
PKP2-204ENST00000546741 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
PKP2-204ENST00000546741 ABCC9O60706 1549 aa27.97■■■□□ 2.07
PKP2-204ENST00000546741 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
PKP2-204ENST00000546741 MYO15BQ96JP2 1530 aa27.81■■■□□ 2.04
PKP2-204ENST00000546741 NACADO15069 1562 aa27.6■■■□□ 2.01
PKP2-204ENST00000546741 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
PKP2-204ENST00000546741 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
PKP2-204ENST00000546741 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
PKP2-204ENST00000546741 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
PKP2-204ENST00000546741 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
PKP2-204ENST00000546741 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
PKP2-204ENST00000546741 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
PKP2-204ENST00000546741 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
PKP2-204ENST00000546741 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
PKP2-204ENST00000546741 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
PKP2-204ENST00000546741 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
PKP2-204ENST00000546741 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
PKP2-204ENST00000546741 WIZO95785 1651 aa25.99■■□□□ 1.75
PKP2-204ENST00000546741 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
PKP2-204ENST00000546741 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
PKP2-204ENST00000546741 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
PKP2-204ENST00000546741 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
PKP2-204ENST00000546741 SMARCA2P51531 1590 aa25.64■■□□□ 1.7
PKP2-204ENST00000546741 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
PKP2-204ENST00000546741 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
PKP2-204ENST00000546741 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
PKP2-204ENST00000546741 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
PKP2-204ENST00000546741 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
PKP2-204ENST00000546741 CFTRP13569 1480 aa24.89■■□□□ 1.58
PKP2-204ENST00000546741 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
PKP2-204ENST00000546741 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
PKP2-204ENST00000546741 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
PKP2-204ENST00000546741 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
PKP2-204ENST00000546741 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
PKP2-204ENST00000546741 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
PKP2-204ENST00000546741 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.54
PKP2-204ENST00000546741 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
PKP2-204ENST00000546741 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
PKP2-204ENST00000546741 NESP48681 1621 aa24.58■■□□□ 1.53
PKP2-204ENST00000546741 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
PKP2-204ENST00000546741 TOP2BQ02880 1626 aa24.56■■□□□ 1.52
PKP2-204ENST00000546741 CUX1P39880 1505 aa24.51■■□□□ 1.51
PKP2-204ENST00000546741 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
PKP2-204ENST00000546741 SOGA1O94964 1423 aa24.38■■□□□ 1.49
PKP2-204ENST00000546741 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
PKP2-204ENST00000546741 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
PKP2-204ENST00000546741 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
PKP2-204ENST00000546741 EEA1Q15075 1411 aa24.33■■□□□ 1.49
PKP2-204ENST00000546741 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
PKP2-204ENST00000546741 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
PKP2-204ENST00000546741 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
PKP2-204ENST00000546741 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
PKP2-204ENST00000546741 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
PKP2-204ENST00000546741 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
PKP2-204ENST00000546741 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
PKP2-204ENST00000546741 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
PKP2-204ENST00000546741 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
PKP2-204ENST00000546741 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
PKP2-204ENST00000546741 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
PKP2-204ENST00000546741 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
PKP2-204ENST00000546741 KIF21BO75037 1637 aa24.05■■□□□ 1.44
PKP2-204ENST00000546741 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
PKP2-204ENST00000546741 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
PKP2-204ENST00000546741 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
PKP2-204ENST00000546741 CUX2O14529 1486 aa24.01■■□□□ 1.43
PKP2-204ENST00000546741 WDR62O43379 1518 aa24■■□□□ 1.43
PKP2-204ENST00000546741 GOLGA3Q08378 1498 aa23.97■■□□□ 1.43
PKP2-204ENST00000546741 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
PKP2-204ENST00000546741 PRXQ9BXM0 1461 aa23.95■■□□□ 1.42
PKP2-204ENST00000546741 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
PKP2-204ENST00000546741 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
PKP2-204ENST00000546741 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
PKP2-204ENST00000546741 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
PKP2-204ENST00000546741 IGF1RP08069 1367 aa23.9■■□□□ 1.42
PKP2-204ENST00000546741 TNIKQ9UKE5 1360 aa23.9■■□□□ 1.42
PKP2-204ENST00000546741 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.41
PKP2-204ENST00000546741 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
PKP2-204ENST00000546741 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
PKP2-204ENST00000546741 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
PKP2-204ENST00000546741 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
PKP2-204ENST00000546741 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
PKP2-204ENST00000546741 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
PKP2-204ENST00000546741 CUL7Q14999 1698 aa23.74■■□□□ 1.39
PKP2-204ENST00000546741 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
PKP2-204ENST00000546741 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
PKP2-204ENST00000546741 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
PKP2-204ENST00000546741 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.37
PKP2-204ENST00000546741 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
PKP2-204ENST00000546741 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
PKP2-204ENST00000546741 CLIP1P30622 1438 aa23.56■■□□□ 1.36
PKP2-204ENST00000546741 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
PKP2-204ENST00000546741 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
PKP2-204ENST00000546741 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
PKP2-204ENST00000546741 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
PKP2-204ENST00000546741 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms