RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
SSH1-204ENST00000546697 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
SSH1-204ENST00000546697 ABCC9O60706 1549 aa33.12■■■□□ 2.89
SSH1-204ENST00000546697 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
SSH1-204ENST00000546697 NACADO15069 1562 aa31.89■■■□□ 2.7
SSH1-204ENST00000546697 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
SSH1-204ENST00000546697 ZCCHC6Q5VYS8 1495 aaKnown RBP31.59■■■□□ 2.65
SSH1-204ENST00000546697 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
SSH1-204ENST00000546697 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
SSH1-204ENST00000546697 UNC13AQ9UPW8 1703 aa31.16■■■□□ 2.58
SSH1-204ENST00000546697 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
SSH1-204ENST00000546697 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
SSH1-204ENST00000546697 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
SSH1-204ENST00000546697 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
SSH1-204ENST00000546697 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
SSH1-204ENST00000546697 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
SSH1-204ENST00000546697 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
SSH1-204ENST00000546697 CECR2Q9BXF3 1484 aa29.85■■■□□ 2.37
SSH1-204ENST00000546697 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
SSH1-204ENST00000546697 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
SSH1-204ENST00000546697 BAZ1AQ9NRL2 1556 aaPredicted RBP29.42■■■□□ 2.3
SSH1-204ENST00000546697 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
SSH1-204ENST00000546697 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
SSH1-204ENST00000546697 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
SSH1-204ENST00000546697 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
SSH1-204ENST00000546697 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
SSH1-204ENST00000546697 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
SSH1-204ENST00000546697 WIZO95785 1651 aa28.8■■■□□ 2.2
SSH1-204ENST00000546697 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
SSH1-204ENST00000546697 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
SSH1-204ENST00000546697 NESP48681 1621 aa28.63■■■□□ 2.17
SSH1-204ENST00000546697 TOP2AP11388 1531 aaKnown RBP28.58■■■□□ 2.17
SSH1-204ENST00000546697 ERCC6Q03468 1493 aa28.54■■■□□ 2.16
SSH1-204ENST00000546697 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.16
SSH1-204ENST00000546697 CUX2O14529 1486 aa28.51■■■□□ 2.15
SSH1-204ENST00000546697 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
SSH1-204ENST00000546697 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
SSH1-204ENST00000546697 CFTRP13569 1480 aa28.34■■■□□ 2.13
SSH1-204ENST00000546697 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
SSH1-204ENST00000546697 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
SSH1-204ENST00000546697 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
SSH1-204ENST00000546697 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
SSH1-204ENST00000546697 WDR62O43379 1518 aa28.12■■■□□ 2.09
SSH1-204ENST00000546697 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
SSH1-204ENST00000546697 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
SSH1-204ENST00000546697 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
SSH1-204ENST00000546697 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
SSH1-204ENST00000546697 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
SSH1-204ENST00000546697 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
SSH1-204ENST00000546697 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
SSH1-204ENST00000546697 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
SSH1-204ENST00000546697 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
SSH1-204ENST00000546697 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
SSH1-204ENST00000546697 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
SSH1-204ENST00000546697 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
SSH1-204ENST00000546697 CUX1P39880 1505 aa27.39■■□□□ 1.98
SSH1-204ENST00000546697 EIF4G3O43432 1585 aaKnown RBP27.31■■□□□ 1.96
SSH1-204ENST00000546697 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
SSH1-204ENST00000546697 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
SSH1-204ENST00000546697 SOGA1O94964 1423 aa27.27■■□□□ 1.96
SSH1-204ENST00000546697 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
SSH1-204ENST00000546697 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.95
SSH1-204ENST00000546697 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
SSH1-204ENST00000546697 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
SSH1-204ENST00000546697 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
SSH1-204ENST00000546697 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
SSH1-204ENST00000546697 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.939e-6■■■■■ 50.1
SSH1-204ENST00000546697 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
SSH1-204ENST00000546697 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
SSH1-204ENST00000546697 ABCA5Q8WWZ7 1642 aa27.02■■□□□ 1.92
SSH1-204ENST00000546697 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
SSH1-204ENST00000546697 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
SSH1-204ENST00000546697 GAPVD1Q14C86 1478 aa26.98■■□□□ 1.91
SSH1-204ENST00000546697 SNAPC4Q5SXM2 1469 aa26.96■■□□□ 1.91
SSH1-204ENST00000546697 CHD1O14646 1710 aa26.96■■□□□ 1.91
SSH1-204ENST00000546697 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
SSH1-204ENST00000546697 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
SSH1-204ENST00000546697 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
SSH1-204ENST00000546697 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
SSH1-204ENST00000546697 RIMBP3CA6NJZ7 1639 aa26.77■■□□□ 1.88
SSH1-204ENST00000546697 RIMBP3BA6NNM3 1639 aa26.77■■□□□ 1.88
SSH1-204ENST00000546697 RIMBP3Q9UFD9 1639 aa26.77■■□□□ 1.88
SSH1-204ENST00000546697 ARHGEF11O15085 1522 aa26.77■■□□□ 1.88
SSH1-204ENST00000546697 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
SSH1-204ENST00000546697 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
SSH1-204ENST00000546697 FBLN2P98095 1184 aa26.73■■□□□ 1.87
SSH1-204ENST00000546697 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
SSH1-204ENST00000546697 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
SSH1-204ENST00000546697 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
SSH1-204ENST00000546697 NUP160Q12769 1436 aa26.64■■□□□ 1.85
SSH1-204ENST00000546697 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
SSH1-204ENST00000546697 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
SSH1-204ENST00000546697 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
SSH1-204ENST00000546697 IGF1RP08069 1367 aa26.53■■□□□ 1.84
SSH1-204ENST00000546697 CUL7Q14999 1698 aa26.47■■□□□ 1.83
SSH1-204ENST00000546697 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
SSH1-204ENST00000546697 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
SSH1-204ENST00000546697 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
SSH1-204ENST00000546697 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
SSH1-204ENST00000546697 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms