RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
KRT18-203ENST00000546656 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
KRT18-203ENST00000546656 ABCC9O60706 1549 aa31.01■■■□□ 2.55
KRT18-203ENST00000546656 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
KRT18-203ENST00000546656 NACADO15069 1562 aa29.38■■■□□ 2.29
KRT18-203ENST00000546656 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
KRT18-203ENST00000546656 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
KRT18-203ENST00000546656 PABPN1Q86U42 306 aaKnown RBP eCLIP28.92■■■□□ 2.22
KRT18-203ENST00000546656 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
KRT18-203ENST00000546656 ZCCHC6Q5VYS8 1495 aaKnown RBP28.9■■■□□ 2.22
KRT18-203ENST00000546656 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
KRT18-203ENST00000546656 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
KRT18-203ENST00000546656 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
KRT18-203ENST00000546656 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
KRT18-203ENST00000546656 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
KRT18-203ENST00000546656 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
KRT18-203ENST00000546656 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
KRT18-203ENST00000546656 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
KRT18-203ENST00000546656 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
KRT18-203ENST00000546656 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
KRT18-203ENST00000546656 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
KRT18-203ENST00000546656 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
KRT18-203ENST00000546656 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
KRT18-203ENST00000546656 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
KRT18-203ENST00000546656 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
KRT18-203ENST00000546656 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
KRT18-203ENST00000546656 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
KRT18-203ENST00000546656 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
KRT18-203ENST00000546656 NESP48681 1621 aa26.71■■□□□ 1.87
KRT18-203ENST00000546656 CUX2O14529 1486 aa26.58■■□□□ 1.85
KRT18-203ENST00000546656 WIZO95785 1651 aa26.54■■□□□ 1.84
KRT18-203ENST00000546656 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
KRT18-203ENST00000546656 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
KRT18-203ENST00000546656 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
KRT18-203ENST00000546656 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
KRT18-203ENST00000546656 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
KRT18-203ENST00000546656 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
KRT18-203ENST00000546656 CADPSQ9ULU8 1353 aa26.32■■□□□ 1.8
KRT18-203ENST00000546656 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
KRT18-203ENST00000546656 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
KRT18-203ENST00000546656 CFTRP13569 1480 aa26.06■■□□□ 1.76
KRT18-203ENST00000546656 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
KRT18-203ENST00000546656 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
KRT18-203ENST00000546656 WDR62O43379 1518 aa26.04■■□□□ 1.76
KRT18-203ENST00000546656 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
KRT18-203ENST00000546656 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.73
KRT18-203ENST00000546656 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
KRT18-203ENST00000546656 TOPBP1Q92547 1522 aa25.58■■□□□ 1.68
KRT18-203ENST00000546656 IFT140Q96RY7 1462 aa25.51■■□□□ 1.67
KRT18-203ENST00000546656 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
KRT18-203ENST00000546656 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
KRT18-203ENST00000546656 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
KRT18-203ENST00000546656 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
KRT18-203ENST00000546656 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
KRT18-203ENST00000546656 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
KRT18-203ENST00000546656 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
KRT18-203ENST00000546656 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
KRT18-203ENST00000546656 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
KRT18-203ENST00000546656 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.641e-9■■■■□ 22
KRT18-203ENST00000546656 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
KRT18-203ENST00000546656 CUX1P39880 1505 aa25.22■■□□□ 1.63
KRT18-203ENST00000546656 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
KRT18-203ENST00000546656 SOGA1O94964 1423 aa25.2■■□□□ 1.63
KRT18-203ENST00000546656 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
KRT18-203ENST00000546656 CHD1O14646 1710 aa25.11■■□□□ 1.61
KRT18-203ENST00000546656 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
KRT18-203ENST00000546656 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
KRT18-203ENST00000546656 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
KRT18-203ENST00000546656 FBLN2P98095 1184 aa25.09■■□□□ 1.61
KRT18-203ENST00000546656 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
KRT18-203ENST00000546656 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
KRT18-203ENST00000546656 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
KRT18-203ENST00000546656 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
KRT18-203ENST00000546656 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
KRT18-203ENST00000546656 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
KRT18-203ENST00000546656 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
KRT18-203ENST00000546656 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
KRT18-203ENST00000546656 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
KRT18-203ENST00000546656 SYNJ2O15056 1496 aa24.86■■□□□ 1.57
KRT18-203ENST00000546656 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
KRT18-203ENST00000546656 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
KRT18-203ENST00000546656 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
KRT18-203ENST00000546656 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
KRT18-203ENST00000546656 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
KRT18-203ENST00000546656 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
KRT18-203ENST00000546656 CLASP1Q7Z460 1538 aa24.82■■□□□ 1.56
KRT18-203ENST00000546656 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
KRT18-203ENST00000546656 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
KRT18-203ENST00000546656 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
KRT18-203ENST00000546656 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
KRT18-203ENST00000546656 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
KRT18-203ENST00000546656 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
KRT18-203ENST00000546656 NUP160Q12769 1436 aa24.55■■□□□ 1.52
KRT18-203ENST00000546656 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
KRT18-203ENST00000546656 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
KRT18-203ENST00000546656 SHROOM2Q13796 1616 aa24.41■■□□□ 1.5
KRT18-203ENST00000546656 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
KRT18-203ENST00000546656 IGF1RP08069 1367 aa24.33■■□□□ 1.49
KRT18-203ENST00000546656 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
KRT18-203ENST00000546656 PRG4Q92954 1404 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms