RNA–Protein interactions for RNA: ENST00000546654.1

RPL41-205, Transcript of ribosomal protein L41, humanhuman

TSL 2

Gene RPL41, Length 238 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL41-205ENST00000546654 NISCHQ9Y2I1 1504 aa14.89□□□□□ -0.03
RPL41-205ENST00000546654 ABCC9O60706 1549 aa14.23□□□□□ -0.13
RPL41-205ENST00000546654 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
RPL41-205ENST00000546654 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
RPL41-205ENST00000546654 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
RPL41-205ENST00000546654 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
RPL41-205ENST00000546654 NACADO15069 1562 aa13.11□□□□□ -0.31
RPL41-205ENST00000546654 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.316e-9■□□□□ 10.5
RPL41-205ENST00000546654 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
RPL41-205ENST00000546654 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
RPL41-205ENST00000546654 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
RPL41-205ENST00000546654 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
RPL41-205ENST00000546654 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
RPL41-205ENST00000546654 SHROOM4Q9ULL8 1493 aa12.79□□□□□ -0.36
RPL41-205ENST00000546654 MYO15BQ96JP2 1530 aa12.73□□□□□ -0.37
RPL41-205ENST00000546654 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
RPL41-205ENST00000546654 CUX2O14529 1486 aa12.62□□□□□ -0.39
RPL41-205ENST00000546654 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
RPL41-205ENST00000546654 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
RPL41-205ENST00000546654 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
RPL41-205ENST00000546654 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
RPL41-205ENST00000546654 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
RPL41-205ENST00000546654 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
RPL41-205ENST00000546654 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
RPL41-205ENST00000546654 NESP48681 1621 aa12.02□□□□□ -0.49
RPL41-205ENST00000546654 HMGXB3Q12766 1538 aa11.96□□□□□ -0.5
RPL41-205ENST00000546654 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
RPL41-205ENST00000546654 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
RPL41-205ENST00000546654 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
RPL41-205ENST00000546654 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
RPL41-205ENST00000546654 AEBP2Q6ZN18 517 aaPredicted RBP11.93□□□□□ -0.5
RPL41-205ENST00000546654 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
RPL41-205ENST00000546654 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
RPL41-205ENST00000546654 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
RPL41-205ENST00000546654 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
RPL41-205ENST00000546654 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
RPL41-205ENST00000546654 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
RPL41-205ENST00000546654 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
RPL41-205ENST00000546654 WDR62O43379 1518 aa11.79□□□□□ -0.52
RPL41-205ENST00000546654 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
RPL41-205ENST00000546654 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
RPL41-205ENST00000546654 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
RPL41-205ENST00000546654 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
RPL41-205ENST00000546654 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
RPL41-205ENST00000546654 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
RPL41-205ENST00000546654 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
RPL41-205ENST00000546654 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
RPL41-205ENST00000546654 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.56
RPL41-205ENST00000546654 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
RPL41-205ENST00000546654 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
RPL41-205ENST00000546654 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
RPL41-205ENST00000546654 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
RPL41-205ENST00000546654 CHD1O14646 1710 aa11.43□□□□□ -0.58
RPL41-205ENST00000546654 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
RPL41-205ENST00000546654 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
RPL41-205ENST00000546654 CFTRP13569 1480 aa11.39□□□□□ -0.59
RPL41-205ENST00000546654 ZNF608Q9ULD9 1512 aaPredicted RBP11.39□□□□□ -0.59
RPL41-205ENST00000546654 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
RPL41-205ENST00000546654 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
RPL41-205ENST00000546654 FBLN2P98095 1184 aa11.29□□□□□ -0.6
RPL41-205ENST00000546654 WIZO95785 1651 aa11.29□□□□□ -0.6
RPL41-205ENST00000546654 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
RPL41-205ENST00000546654 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
RPL41-205ENST00000546654 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
RPL41-205ENST00000546654 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
RPL41-205ENST00000546654 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.618e-42■■■■■ 77.3
RPL41-205ENST00000546654 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
RPL41-205ENST00000546654 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
RPL41-205ENST00000546654 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
RPL41-205ENST00000546654 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
RPL41-205ENST00000546654 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
RPL41-205ENST00000546654 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
RPL41-205ENST00000546654 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
RPL41-205ENST00000546654 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
RPL41-205ENST00000546654 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
RPL41-205ENST00000546654 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
RPL41-205ENST00000546654 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
RPL41-205ENST00000546654 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
RPL41-205ENST00000546654 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
RPL41-205ENST00000546654 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
RPL41-205ENST00000546654 KDM6BO15054 1643 aa11.02□□□□□ -0.64
RPL41-205ENST00000546654 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
RPL41-205ENST00000546654 SOGA1O94964 1423 aa11.01□□□□□ -0.65
RPL41-205ENST00000546654 GRIN2BQ13224 1484 aa11.01□□□□□ -0.65
RPL41-205ENST00000546654 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
RPL41-205ENST00000546654 HECW2Q9P2P5 1572 aa10.99□□□□□ -0.65
RPL41-205ENST00000546654 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
RPL41-205ENST00000546654 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
RPL41-205ENST00000546654 ABCC10Q5T3U5 1492 aa10.96□□□□□ -0.65
RPL41-205ENST00000546654 FAM69CQ0P6D2 419 aa10.96□□□□□ -0.65
RPL41-205ENST00000546654 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
RPL41-205ENST00000546654 DIP2BQ9P265 1576 aa10.92□□□□□ -0.66
RPL41-205ENST00000546654 LMTK3Q96Q04 1460 aa10.92□□□□□ -0.66
RPL41-205ENST00000546654 TSPOAP1O95153 1857 aa10.91□□□□□ -0.66
RPL41-205ENST00000546654 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
RPL41-205ENST00000546654 MAPKBP1O60336 1514 aa10.91□□□□□ -0.66
RPL41-205ENST00000546654 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
RPL41-205ENST00000546654 ADGRL1O94910 1474 aa10.91□□□□□ -0.66
RPL41-205ENST00000546654 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.66
RPL41-205ENST00000546654 GRIN2AQ12879 1464 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms