RNA–Protein interactions for RNA: ENST00000546639.1

SDS-202, Transcript of serine dehydratase, humanhuman

TSL 2

Gene SDS, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-202ENST00000546639 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
SDS-202ENST00000546639 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SDS-202ENST00000546639 ABCC9O60706 1549 aa24.44■■□□□ 1.5
SDS-202ENST00000546639 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
SDS-202ENST00000546639 NACADO15069 1562 aa23.29■■□□□ 1.32
SDS-202ENST00000546639 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
SDS-202ENST00000546639 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
SDS-202ENST00000546639 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
SDS-202ENST00000546639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
SDS-202ENST00000546639 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
SDS-202ENST00000546639 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
SDS-202ENST00000546639 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
SDS-202ENST00000546639 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
SDS-202ENST00000546639 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
SDS-202ENST00000546639 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
SDS-202ENST00000546639 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
SDS-202ENST00000546639 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
SDS-202ENST00000546639 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
SDS-202ENST00000546639 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
SDS-202ENST00000546639 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
SDS-202ENST00000546639 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
SDS-202ENST00000546639 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
SDS-202ENST00000546639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
SDS-202ENST00000546639 HMGXB3Q12766 1538 aa21.33■■□□□ 1
SDS-202ENST00000546639 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
SDS-202ENST00000546639 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
SDS-202ENST00000546639 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
SDS-202ENST00000546639 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
SDS-202ENST00000546639 CUX2O14529 1486 aa21.12■□□□□ 0.97
SDS-202ENST00000546639 NESP48681 1621 aa21■□□□□ 0.95
SDS-202ENST00000546639 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
SDS-202ENST00000546639 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
SDS-202ENST00000546639 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
SDS-202ENST00000546639 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
SDS-202ENST00000546639 WIZO95785 1651 aa20.84■□□□□ 0.93
SDS-202ENST00000546639 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
SDS-202ENST00000546639 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
SDS-202ENST00000546639 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
SDS-202ENST00000546639 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
SDS-202ENST00000546639 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
SDS-202ENST00000546639 CFTRP13569 1480 aa20.62■□□□□ 0.89
SDS-202ENST00000546639 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
SDS-202ENST00000546639 WDR62O43379 1518 aa20.58■□□□□ 0.88
SDS-202ENST00000546639 FANCD2Q9BXW9 1451 aa20.57■□□□□ 0.88
SDS-202ENST00000546639 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
SDS-202ENST00000546639 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
SDS-202ENST00000546639 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
SDS-202ENST00000546639 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
SDS-202ENST00000546639 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
SDS-202ENST00000546639 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
SDS-202ENST00000546639 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
SDS-202ENST00000546639 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
SDS-202ENST00000546639 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
SDS-202ENST00000546639 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SDS-202ENST00000546639 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
SDS-202ENST00000546639 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
SDS-202ENST00000546639 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
SDS-202ENST00000546639 SOGA1O94964 1423 aa19.93■□□□□ 0.78
SDS-202ENST00000546639 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.78
SDS-202ENST00000546639 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
SDS-202ENST00000546639 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
SDS-202ENST00000546639 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
SDS-202ENST00000546639 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
SDS-202ENST00000546639 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
SDS-202ENST00000546639 CUX1P39880 1505 aa19.84■□□□□ 0.77
SDS-202ENST00000546639 FBLN2P98095 1184 aa19.82■□□□□ 0.76
SDS-202ENST00000546639 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
SDS-202ENST00000546639 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
SDS-202ENST00000546639 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
SDS-202ENST00000546639 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
SDS-202ENST00000546639 CHD1O14646 1710 aa19.76■□□□□ 0.75
SDS-202ENST00000546639 GRIN2BQ13224 1484 aa19.75■□□□□ 0.75
SDS-202ENST00000546639 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
SDS-202ENST00000546639 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
SDS-202ENST00000546639 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
SDS-202ENST00000546639 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
SDS-202ENST00000546639 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
SDS-202ENST00000546639 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
SDS-202ENST00000546639 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
SDS-202ENST00000546639 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
SDS-202ENST00000546639 SYNJ1O43426 1573 aa19.64■□□□□ 0.73
SDS-202ENST00000546639 CLASP1Q7Z460 1538 aa19.6■□□□□ 0.73
SDS-202ENST00000546639 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
SDS-202ENST00000546639 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
SDS-202ENST00000546639 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
SDS-202ENST00000546639 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
SDS-202ENST00000546639 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
SDS-202ENST00000546639 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
SDS-202ENST00000546639 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
SDS-202ENST00000546639 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
SDS-202ENST00000546639 ADAMTS12P58397 1594 aa19.43■□□□□ 0.7
SDS-202ENST00000546639 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
SDS-202ENST00000546639 NUP160Q12769 1436 aa19.42■□□□□ 0.7
SDS-202ENST00000546639 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
SDS-202ENST00000546639 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
SDS-202ENST00000546639 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
SDS-202ENST00000546639 JPH4Q96JJ6 628 aa19.26■□□□□ 0.67
SDS-202ENST00000546639 IGF1RP08069 1367 aa19.23■□□□□ 0.67
SDS-202ENST00000546639 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
SDS-202ENST00000546639 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms