RNA–Protein interactions for RNA: ENST00000546629.1

WSCD2-203, Transcript of WSC domain containing 2, humanhuman

TSL 3

Gene WSCD2, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WSCD2-203ENST00000546629 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
WSCD2-203ENST00000546629 ABCC9O60706 1549 aa30.91■■■□□ 2.54
WSCD2-203ENST00000546629 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
WSCD2-203ENST00000546629 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
WSCD2-203ENST00000546629 RB1CC1Q8TDY2 1594 aa29.06■■■□□ 2.24
WSCD2-203ENST00000546629 NACADO15069 1562 aa28.7■■■□□ 2.18
WSCD2-203ENST00000546629 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
WSCD2-203ENST00000546629 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
WSCD2-203ENST00000546629 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
WSCD2-203ENST00000546629 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
WSCD2-203ENST00000546629 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
WSCD2-203ENST00000546629 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
WSCD2-203ENST00000546629 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
WSCD2-203ENST00000546629 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
WSCD2-203ENST00000546629 EIF4G1Q04637 1599 aaKnown RBP27.66■■■□□ 2.02
WSCD2-203ENST00000546629 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
WSCD2-203ENST00000546629 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
WSCD2-203ENST00000546629 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
WSCD2-203ENST00000546629 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
WSCD2-203ENST00000546629 CUX2O14529 1486 aa26.77■■□□□ 1.88
WSCD2-203ENST00000546629 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
WSCD2-203ENST00000546629 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
WSCD2-203ENST00000546629 NESP48681 1621 aa26.44■■□□□ 1.82
WSCD2-203ENST00000546629 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
WSCD2-203ENST00000546629 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
WSCD2-203ENST00000546629 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
WSCD2-203ENST00000546629 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
WSCD2-203ENST00000546629 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
WSCD2-203ENST00000546629 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
WSCD2-203ENST00000546629 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
WSCD2-203ENST00000546629 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
WSCD2-203ENST00000546629 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
WSCD2-203ENST00000546629 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
WSCD2-203ENST00000546629 BAZ1AQ9NRL2 1556 aaPredicted RBP25.94■■□□□ 1.74
WSCD2-203ENST00000546629 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
WSCD2-203ENST00000546629 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
WSCD2-203ENST00000546629 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
WSCD2-203ENST00000546629 WDR62O43379 1518 aa25.7■■□□□ 1.7
WSCD2-203ENST00000546629 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.69
WSCD2-203ENST00000546629 WIZO95785 1651 aa25.54■■□□□ 1.68
WSCD2-203ENST00000546629 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
WSCD2-203ENST00000546629 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
WSCD2-203ENST00000546629 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
WSCD2-203ENST00000546629 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
WSCD2-203ENST00000546629 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
WSCD2-203ENST00000546629 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
WSCD2-203ENST00000546629 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
WSCD2-203ENST00000546629 CFTRP13569 1480 aa25.26■■□□□ 1.63
WSCD2-203ENST00000546629 ARHGEF11O15085 1522 aa25.13■■□□□ 1.61
WSCD2-203ENST00000546629 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
WSCD2-203ENST00000546629 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
WSCD2-203ENST00000546629 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
WSCD2-203ENST00000546629 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
WSCD2-203ENST00000546629 CHD1O14646 1710 aa24.97■■□□□ 1.59
WSCD2-203ENST00000546629 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
WSCD2-203ENST00000546629 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
WSCD2-203ENST00000546629 CYB5RLQ6IPT4 315 aa24.93■■□□□ 1.58
WSCD2-203ENST00000546629 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
WSCD2-203ENST00000546629 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
WSCD2-203ENST00000546629 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
WSCD2-203ENST00000546629 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
WSCD2-203ENST00000546629 TARBP1Q13395 1621 aaKnown RBP24.78■■□□□ 1.56
WSCD2-203ENST00000546629 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
WSCD2-203ENST00000546629 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
WSCD2-203ENST00000546629 FBLN2P98095 1184 aa24.65■■□□□ 1.54
WSCD2-203ENST00000546629 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
WSCD2-203ENST00000546629 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
WSCD2-203ENST00000546629 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
WSCD2-203ENST00000546629 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
WSCD2-203ENST00000546629 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
WSCD2-203ENST00000546629 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
WSCD2-203ENST00000546629 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
WSCD2-203ENST00000546629 SOGA1O94964 1423 aa24.41■■□□□ 1.5
WSCD2-203ENST00000546629 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
WSCD2-203ENST00000546629 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
WSCD2-203ENST00000546629 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
WSCD2-203ENST00000546629 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
WSCD2-203ENST00000546629 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
WSCD2-203ENST00000546629 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
WSCD2-203ENST00000546629 CUX1P39880 1505 aa24.29■■□□□ 1.48
WSCD2-203ENST00000546629 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
WSCD2-203ENST00000546629 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
WSCD2-203ENST00000546629 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
WSCD2-203ENST00000546629 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
WSCD2-203ENST00000546629 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
WSCD2-203ENST00000546629 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
WSCD2-203ENST00000546629 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
WSCD2-203ENST00000546629 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
WSCD2-203ENST00000546629 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
WSCD2-203ENST00000546629 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
WSCD2-203ENST00000546629 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
WSCD2-203ENST00000546629 NUP160Q12769 1436 aa23.93■■□□□ 1.42
WSCD2-203ENST00000546629 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
WSCD2-203ENST00000546629 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
WSCD2-203ENST00000546629 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
WSCD2-203ENST00000546629 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
WSCD2-203ENST00000546629 TSPOAP1O95153 1857 aa23.72■■□□□ 1.39
WSCD2-203ENST00000546629 DIP2BQ9P265 1576 aa23.71■■□□□ 1.39
WSCD2-203ENST00000546629 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
WSCD2-203ENST00000546629 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms