RNA–Protein interactions for RNA: ENST00000546622.1

MSI1-202, Transcript of musashi RNA binding protein 1, humanhuman

TSL 3

Gene MSI1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-202ENST00000546622 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
MSI1-202ENST00000546622 ABCC9O60706 1549 aa30.26■■■□□ 2.43
MSI1-202ENST00000546622 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
MSI1-202ENST00000546622 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
MSI1-202ENST00000546622 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
MSI1-202ENST00000546622 NACADO15069 1562 aa28.48■■■□□ 2.15
MSI1-202ENST00000546622 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
MSI1-202ENST00000546622 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
MSI1-202ENST00000546622 UNC13AQ9UPW8 1703 aa28.11■■■□□ 2.09
MSI1-202ENST00000546622 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
MSI1-202ENST00000546622 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
MSI1-202ENST00000546622 ZCCHC6Q5VYS8 1495 aaKnown RBP27.62■■■□□ 2.01
MSI1-202ENST00000546622 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
MSI1-202ENST00000546622 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
MSI1-202ENST00000546622 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
MSI1-202ENST00000546622 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
MSI1-202ENST00000546622 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
MSI1-202ENST00000546622 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
MSI1-202ENST00000546622 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
MSI1-202ENST00000546622 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
MSI1-202ENST00000546622 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
MSI1-202ENST00000546622 CUX2O14529 1486 aa26.17■■□□□ 1.78
MSI1-202ENST00000546622 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
MSI1-202ENST00000546622 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
MSI1-202ENST00000546622 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
MSI1-202ENST00000546622 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
MSI1-202ENST00000546622 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
MSI1-202ENST00000546622 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
MSI1-202ENST00000546622 NESP48681 1621 aa25.92■■□□□ 1.74
MSI1-202ENST00000546622 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
MSI1-202ENST00000546622 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
MSI1-202ENST00000546622 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
MSI1-202ENST00000546622 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
MSI1-202ENST00000546622 KIF21AQ7Z4S6 1674 aa25.63■■□□□ 1.69
MSI1-202ENST00000546622 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
MSI1-202ENST00000546622 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
MSI1-202ENST00000546622 WIZO95785 1651 aa25.44■■□□□ 1.66
MSI1-202ENST00000546622 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
MSI1-202ENST00000546622 WDR62O43379 1518 aa25.31■■□□□ 1.64
MSI1-202ENST00000546622 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
MSI1-202ENST00000546622 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
MSI1-202ENST00000546622 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
MSI1-202ENST00000546622 CFTRP13569 1480 aa25.12■■□□□ 1.61
MSI1-202ENST00000546622 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
MSI1-202ENST00000546622 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
MSI1-202ENST00000546622 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
MSI1-202ENST00000546622 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
MSI1-202ENST00000546622 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
MSI1-202ENST00000546622 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
MSI1-202ENST00000546622 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
MSI1-202ENST00000546622 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
MSI1-202ENST00000546622 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
MSI1-202ENST00000546622 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
MSI1-202ENST00000546622 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
MSI1-202ENST00000546622 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
MSI1-202ENST00000546622 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
MSI1-202ENST00000546622 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
MSI1-202ENST00000546622 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
MSI1-202ENST00000546622 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
MSI1-202ENST00000546622 CHD1O14646 1710 aa24.48■■□□□ 1.51
MSI1-202ENST00000546622 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
MSI1-202ENST00000546622 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
MSI1-202ENST00000546622 FBLN2P98095 1184 aa24.42■■□□□ 1.5
MSI1-202ENST00000546622 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
MSI1-202ENST00000546622 CYB5RLQ6IPT4 315 aa24.39■■□□□ 1.49
MSI1-202ENST00000546622 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
MSI1-202ENST00000546622 SOGA1O94964 1423 aa24.33■■□□□ 1.49
MSI1-202ENST00000546622 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
MSI1-202ENST00000546622 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
MSI1-202ENST00000546622 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
MSI1-202ENST00000546622 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
MSI1-202ENST00000546622 TRHP20396 242 aaPredicted RBP24.24■■□□□ 1.47
MSI1-202ENST00000546622 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
MSI1-202ENST00000546622 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
MSI1-202ENST00000546622 CUX1P39880 1505 aa24.17■■□□□ 1.46
MSI1-202ENST00000546622 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
MSI1-202ENST00000546622 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
MSI1-202ENST00000546622 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
MSI1-202ENST00000546622 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
MSI1-202ENST00000546622 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
MSI1-202ENST00000546622 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
MSI1-202ENST00000546622 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
MSI1-202ENST00000546622 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
MSI1-202ENST00000546622 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
MSI1-202ENST00000546622 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
MSI1-202ENST00000546622 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
MSI1-202ENST00000546622 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
MSI1-202ENST00000546622 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
MSI1-202ENST00000546622 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
MSI1-202ENST00000546622 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
MSI1-202ENST00000546622 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
MSI1-202ENST00000546622 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
MSI1-202ENST00000546622 NUP160Q12769 1436 aa23.72■■□□□ 1.39
MSI1-202ENST00000546622 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
MSI1-202ENST00000546622 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
MSI1-202ENST00000546622 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
MSI1-202ENST00000546622 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
MSI1-202ENST00000546622 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
MSI1-202ENST00000546622 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
MSI1-202ENST00000546622 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms