RNA–Protein interactions for RNA: ENST00000546595.5

RACGAP1-204, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 5

Gene RACGAP1, Length 634 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-204ENST00000546595 NISCHQ9Y2I1 1504 aa37.02■■■■□ 3.52
RACGAP1-204ENST00000546595 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
RACGAP1-204ENST00000546595 ABCC9O60706 1549 aa32.39■■■□□ 2.78
RACGAP1-204ENST00000546595 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
RACGAP1-204ENST00000546595 NACADO15069 1562 aa31.09■■■□□ 2.57
RACGAP1-204ENST00000546595 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
RACGAP1-204ENST00000546595 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
RACGAP1-204ENST00000546595 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
RACGAP1-204ENST00000546595 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
RACGAP1-204ENST00000546595 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
RACGAP1-204ENST00000546595 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
RACGAP1-204ENST00000546595 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
RACGAP1-204ENST00000546595 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
RACGAP1-204ENST00000546595 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
RACGAP1-204ENST00000546595 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
RACGAP1-204ENST00000546595 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
RACGAP1-204ENST00000546595 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
RACGAP1-204ENST00000546595 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
RACGAP1-204ENST00000546595 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
RACGAP1-204ENST00000546595 NCAPD3P42695 1498 aa28.7■■■□□ 2.18
RACGAP1-204ENST00000546595 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
RACGAP1-204ENST00000546595 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
RACGAP1-204ENST00000546595 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
RACGAP1-204ENST00000546595 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
RACGAP1-204ENST00000546595 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
RACGAP1-204ENST00000546595 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
RACGAP1-204ENST00000546595 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
RACGAP1-204ENST00000546595 WIZO95785 1651 aa28.18■■■□□ 2.1
RACGAP1-204ENST00000546595 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
RACGAP1-204ENST00000546595 NESP48681 1621 aa28■■■□□ 2.07
RACGAP1-204ENST00000546595 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
RACGAP1-204ENST00000546595 ERCC6Q03468 1493 aa27.9■■■□□ 2.06
RACGAP1-204ENST00000546595 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
RACGAP1-204ENST00000546595 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
RACGAP1-204ENST00000546595 CUX2O14529 1486 aa27.79■■■□□ 2.04
RACGAP1-204ENST00000546595 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
RACGAP1-204ENST00000546595 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
RACGAP1-204ENST00000546595 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
RACGAP1-204ENST00000546595 CFTRP13569 1480 aa27.64■■■□□ 2.01
RACGAP1-204ENST00000546595 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
RACGAP1-204ENST00000546595 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
RACGAP1-204ENST00000546595 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
RACGAP1-204ENST00000546595 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
RACGAP1-204ENST00000546595 WDR62O43379 1518 aa27.44■■□□□ 1.98
RACGAP1-204ENST00000546595 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
RACGAP1-204ENST00000546595 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
RACGAP1-204ENST00000546595 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
RACGAP1-204ENST00000546595 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
RACGAP1-204ENST00000546595 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
RACGAP1-204ENST00000546595 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
RACGAP1-204ENST00000546595 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
RACGAP1-204ENST00000546595 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
RACGAP1-204ENST00000546595 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
RACGAP1-204ENST00000546595 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
RACGAP1-204ENST00000546595 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
RACGAP1-204ENST00000546595 CUX1P39880 1505 aa26.76■■□□□ 1.87
RACGAP1-204ENST00000546595 EIF4G3O43432 1585 aaKnown RBP26.7■■□□□ 1.86
RACGAP1-204ENST00000546595 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
RACGAP1-204ENST00000546595 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
RACGAP1-204ENST00000546595 SOGA1O94964 1423 aa26.63■■□□□ 1.85
RACGAP1-204ENST00000546595 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
RACGAP1-204ENST00000546595 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.851e-6■■■□□ 14.8
RACGAP1-204ENST00000546595 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
RACGAP1-204ENST00000546595 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
RACGAP1-204ENST00000546595 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
RACGAP1-204ENST00000546595 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
RACGAP1-204ENST00000546595 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
RACGAP1-204ENST00000546595 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
RACGAP1-204ENST00000546595 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
RACGAP1-204ENST00000546595 CHD1O14646 1710 aa26.39■■□□□ 1.81
RACGAP1-204ENST00000546595 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
RACGAP1-204ENST00000546595 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
RACGAP1-204ENST00000546595 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
RACGAP1-204ENST00000546595 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
RACGAP1-204ENST00000546595 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
RACGAP1-204ENST00000546595 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
RACGAP1-204ENST00000546595 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
RACGAP1-204ENST00000546595 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
RACGAP1-204ENST00000546595 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
RACGAP1-204ENST00000546595 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
RACGAP1-204ENST00000546595 FBLN2P98095 1184 aa26.17■■□□□ 1.78
RACGAP1-204ENST00000546595 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
RACGAP1-204ENST00000546595 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
RACGAP1-204ENST00000546595 CHMP7Q8WUX9 453 aaPredicted RBP26.13■■□□□ 1.77
RACGAP1-204ENST00000546595 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
RACGAP1-204ENST00000546595 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
RACGAP1-204ENST00000546595 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
RACGAP1-204ENST00000546595 FHAD1B1AJZ9 1412 aa26.03■■□□□ 1.76
RACGAP1-204ENST00000546595 TRIM41Q8WV44 630 aa26■■□□□ 1.75
RACGAP1-204ENST00000546595 NUP160Q12769 1436 aa25.97■■□□□ 1.75
RACGAP1-204ENST00000546595 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
RACGAP1-204ENST00000546595 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
RACGAP1-204ENST00000546595 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
RACGAP1-204ENST00000546595 IGF1RP08069 1367 aa25.87■■□□□ 1.73
RACGAP1-204ENST00000546595 CUL7Q14999 1698 aa25.84■■□□□ 1.73
RACGAP1-204ENST00000546595 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
RACGAP1-204ENST00000546595 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
RACGAP1-204ENST00000546595 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
RACGAP1-204ENST00000546595 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
RACGAP1-204ENST00000546595 CARMIL1Q5VZK9 1371 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms