RNA–Protein interactions for RNA: ENST00000546506.5

TWF1-202, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 3

Gene TWF1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-202ENST00000546506 NISCHQ9Y2I1 1504 aa53.02■■■■■ 6.08
TWF1-202ENST00000546506 ABCC9O60706 1549 aa47.76■■■■■ 5.24
TWF1-202ENST00000546506 CCDC180Q9P1Z9 1646 aa47.66■■■■■ 5.22
TWF1-202ENST00000546506 RB1CC1Q8TDY2 1594 aa45.35■■■■■ 4.85
TWF1-202ENST00000546506 NACADO15069 1562 aa44.97■■■■■ 4.79
TWF1-202ENST00000546506 DCAF8L2P0C7V8 631 aa44.88■■■■■ 4.78
TWF1-202ENST00000546506 DNAJC5BQ9UF47 199 aa44.78■■■■■ 4.76
TWF1-202ENST00000546506 UNC13AQ9UPW8 1703 aa44.6■■■■■ 4.73
TWF1-202ENST00000546506 PABPN1Q86U42 306 aaKnown RBP eCLIP44.43■■■■■ 4.7
TWF1-202ENST00000546506 MYO15BQ96JP2 1530 aa44.21■■■■■ 4.67
TWF1-202ENST00000546506 BICRAQ9NZM4 1560 aa44.09■■■■■ 4.65
TWF1-202ENST00000546506 ZCCHC6Q5VYS8 1495 aaKnown RBP43.94■■■■■ 4.62
TWF1-202ENST00000546506 DCAF1Q9Y4B6 1507 aa43.68■■■■■ 4.58
TWF1-202ENST00000546506 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
TWF1-202ENST00000546506 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
TWF1-202ENST00000546506 CC2D2AQ9P2K1 1620 aa43.15■■■■■ 4.5
TWF1-202ENST00000546506 EIF4G1Q04637 1599 aaKnown RBP42.99■■■■■ 4.47
TWF1-202ENST00000546506 CECR2Q9BXF3 1484 aa42.94■■■■■ 4.47
TWF1-202ENST00000546506 SMARCA4P51532 1647 aa41.46■■■■■ 4.23
TWF1-202ENST00000546506 NCAPD3P42695 1498 aa41.46■■■■■ 4.23
TWF1-202ENST00000546506 ATAD2BQ9ULI0 1458 aa41.41■■■■■ 4.22
TWF1-202ENST00000546506 SMARCA2P51531 1590 aa41.29■■■■■ 4.2
TWF1-202ENST00000546506 HMGXB3Q12766 1538 aa41.23■■■■■ 4.19
TWF1-202ENST00000546506 ERCC6Q03468 1493 aa41.19■■■■■ 4.18
TWF1-202ENST00000546506 BAZ1AQ9NRL2 1556 aaPredicted RBP41.16■■■■■ 4.18
TWF1-202ENST00000546506 BAZ1BQ9UIG0 1483 aaKnown RBP41.05■■■■■ 4.16
TWF1-202ENST00000546506 NESP48681 1621 aa41.04■■■■■ 4.16
TWF1-202ENST00000546506 DNAJC5Q9H3Z4 198 aa41.02■■■■■ 4.16
TWF1-202ENST00000546506 CUX2O14529 1486 aa41.02■■■■■ 4.16
TWF1-202ENST00000546506 PEG3Q9GZU2 1588 aa40.94■■■■■ 4.14
TWF1-202ENST00000546506 MROH2BQ7Z745 1585 aa40.93■■■■■ 4.14
TWF1-202ENST00000546506 LAMC3Q9Y6N6 1575 aa40.64■■■■■ 4.1
TWF1-202ENST00000546506 THOC2Q8NI27 1593 aaKnown RBP40.62■■■■■ 4.09
TWF1-202ENST00000546506 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
TWF1-202ENST00000546506 WIZO95785 1651 aa40.55■■■■■ 4.08
TWF1-202ENST00000546506 PDS5BQ9NTI5 1447 aa40.32■■■■■ 4.04
TWF1-202ENST00000546506 CADPSQ9ULU8 1353 aa40.23■■■■■ 4.03
TWF1-202ENST00000546506 MRC2Q9UBG0 1479 aa40.05■■■■■ 4
TWF1-202ENST00000546506 RSF1Q96T23 1441 aaPredicted RBP39.99■■■■□ 3.99
TWF1-202ENST00000546506 WDR62O43379 1518 aa39.97■■■■□ 3.99
TWF1-202ENST00000546506 CEP164Q9UPV0 1460 aa39.9■■■■□ 3.98
TWF1-202ENST00000546506 TOP2AP11388 1531 aaKnown RBP39.89■■■■□ 3.98
TWF1-202ENST00000546506 FANCD2Q9BXW9 1451 aa39.85■■■■□ 3.97
TWF1-202ENST00000546506 CFTRP13569 1480 aa39.77■■■■□ 3.96
TWF1-202ENST00000546506 PRDM2Q13029 1718 aa39.63■■■■□ 3.94
TWF1-202ENST00000546506 URB2Q14146 1524 aaKnown RBP39.56■■■■□ 3.92
TWF1-202ENST00000546506 CCDC88BA6NC98 1476 aa39.43■■■■□ 3.9
TWF1-202ENST00000546506 TRIM41Q8WV44 630 aa39.4■■■■□ 3.9
TWF1-202ENST00000546506 OSCARQ8IYS5 282 aa39.12■■■■□ 3.85
TWF1-202ENST00000546506 TOPBP1Q92547 1522 aa39.11■■■■□ 3.85
TWF1-202ENST00000546506 ZNF608Q9ULD9 1512 aaPredicted RBP39.11■■■■□ 3.85
TWF1-202ENST00000546506 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
TWF1-202ENST00000546506 DNMBPQ6XZF7 1577 aa38.97■■■■□ 3.83
TWF1-202ENST00000546506 EIF4G3O43432 1585 aaKnown RBP38.94■■■■□ 3.82
TWF1-202ENST00000546506 ABCC8Q09428 1581 aa38.89■■■■□ 3.82
TWF1-202ENST00000546506 RIMBP3CA6NJZ7 1639 aa38.83■■■■□ 3.81
TWF1-202ENST00000546506 RIMBP3BA6NNM3 1639 aa38.83■■■■□ 3.81
TWF1-202ENST00000546506 RIMBP3Q9UFD9 1639 aa38.83■■■■□ 3.81
TWF1-202ENST00000546506 TARBP1Q13395 1621 aaKnown RBP38.81■■■■□ 3.8
TWF1-202ENST00000546506 CHD1O14646 1710 aa38.76■■■■□ 3.8
TWF1-202ENST00000546506 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.798e-7■□□□□ 10.2
TWF1-202ENST00000546506 POLA1P09884 1462 aaPredicted RBP38.7■■■■□ 3.79
TWF1-202ENST00000546506 RAD54L2Q9Y4B4 1467 aa38.62■■■■□ 3.77
TWF1-202ENST00000546506 ARHGEF11O15085 1522 aa38.62■■■■□ 3.77
TWF1-202ENST00000546506 FBLN2P98095 1184 aa38.49■■■■□ 3.75
TWF1-202ENST00000546506 FGD5Q6ZNL6 1462 aa38.48■■■■□ 3.75
TWF1-202ENST00000546506 SOGA1O94964 1423 aa38.48■■■■□ 3.75
TWF1-202ENST00000546506 TDRD9Q8NDG6 1382 aaKnown RBP38.46■■■■□ 3.75
TWF1-202ENST00000546506 CUX1P39880 1505 aa38.46■■■■□ 3.75
TWF1-202ENST00000546506 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
TWF1-202ENST00000546506 CYB5RLQ6IPT4 315 aa38.31■■■■□ 3.72
TWF1-202ENST00000546506 SUPT5HO00267 1087 aaKnown RBP38.3■■■■□ 3.72
TWF1-202ENST00000546506 WDR97A6NE52 1622 aa38.3■■■■□ 3.72
TWF1-202ENST00000546506 ARAP1Q96P48 1450 aa38.24■■■■□ 3.71
TWF1-202ENST00000546506 PBRM1Q86U86 1689 aa38.23■■■■□ 3.71
TWF1-202ENST00000546506 GRIN2BQ13224 1484 aa38.14■■■■□ 3.7
TWF1-202ENST00000546506 MAGI1Q96QZ7 1491 aaPredicted RBP38.14■■■■□ 3.7
TWF1-202ENST00000546506 CLASP1Q7Z460 1538 aa38.13■■■■□ 3.69
TWF1-202ENST00000546506 CHMP7Q8WUX9 453 aaPredicted RBP38.11■■■■□ 3.69
TWF1-202ENST00000546506 SYNJ1O43426 1573 aa38.1■■■■□ 3.69
TWF1-202ENST00000546506 GAPVD1Q14C86 1478 aa38.04■■■■□ 3.68
TWF1-202ENST00000546506 SYNJ2O15056 1496 aa38.03■■■■□ 3.68
TWF1-202ENST00000546506 ABCA5Q8WWZ7 1642 aa38.01■■■■□ 3.68
TWF1-202ENST00000546506 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
TWF1-202ENST00000546506 TRHP20396 242 aaPredicted RBP37.93■■■■□ 3.66
TWF1-202ENST00000546506 BIVM-ERCC5R4GMW8 1640 aa37.86■■■■□ 3.65
TWF1-202ENST00000546506 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
TWF1-202ENST00000546506 WRNQ14191 1432 aaPredicted RBP eCLIP37.78■■■■□ 3.64
TWF1-202ENST00000546506 ADAMTS12P58397 1594 aa37.74■■■■□ 3.63
TWF1-202ENST00000546506 GRIN2AQ12879 1464 aa37.7■■■■□ 3.63
TWF1-202ENST00000546506 CEP170Q5SW79 1584 aa37.65■■■■□ 3.62
TWF1-202ENST00000546506 ERCC6L2Q5T890 1561 aa37.65■■■■□ 3.62
TWF1-202ENST00000546506 NUP160Q12769 1436 aa37.52■■■■□ 3.6
TWF1-202ENST00000546506 FHAD1B1AJZ9 1412 aa37.5■■■■□ 3.59
TWF1-202ENST00000546506 ERICH3Q5RHP9 1530 aa37.49■■■■□ 3.59
TWF1-202ENST00000546506 SHROOM2Q13796 1616 aa37.45■■■■□ 3.59
TWF1-202ENST00000546506 RUSC2Q8N2Y8 1516 aa37.21■■■■□ 3.55
TWF1-202ENST00000546506 PRG4Q92954 1404 aaPredicted RBP37.2■■■■□ 3.55
TWF1-202ENST00000546506 JPH4Q96JJ6 628 aa37.12■■■■□ 3.53
TWF1-202ENST00000546506 KIF13AQ9H1H9 1805 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms