RNA–Protein interactions for RNA: ENST00000546485.5

RPL41-203, Transcript of ribosomal protein L41, humanhuman

TSL 2

Gene RPL41, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL41-203ENST00000546485 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
RPL41-203ENST00000546485 ABCC9O60706 1549 aa15.45■□□□□ 0.06
RPL41-203ENST00000546485 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
RPL41-203ENST00000546485 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
RPL41-203ENST00000546485 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
RPL41-203ENST00000546485 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.125e-9■□□□□ 10.3
RPL41-203ENST00000546485 NACADO15069 1562 aa14.26□□□□□ -0.13
RPL41-203ENST00000546485 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
RPL41-203ENST00000546485 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
RPL41-203ENST00000546485 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
RPL41-203ENST00000546485 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
RPL41-203ENST00000546485 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
RPL41-203ENST00000546485 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
RPL41-203ENST00000546485 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
RPL41-203ENST00000546485 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
RPL41-203ENST00000546485 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
RPL41-203ENST00000546485 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
RPL41-203ENST00000546485 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
RPL41-203ENST00000546485 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
RPL41-203ENST00000546485 CUX2O14529 1486 aa13.49□□□□□ -0.25
RPL41-203ENST00000546485 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
RPL41-203ENST00000546485 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
RPL41-203ENST00000546485 NESP48681 1621 aa13.17□□□□□ -0.3
RPL41-203ENST00000546485 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
RPL41-203ENST00000546485 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
RPL41-203ENST00000546485 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
RPL41-203ENST00000546485 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
RPL41-203ENST00000546485 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
RPL41-203ENST00000546485 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
RPL41-203ENST00000546485 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
RPL41-203ENST00000546485 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
RPL41-203ENST00000546485 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
RPL41-203ENST00000546485 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
RPL41-203ENST00000546485 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
RPL41-203ENST00000546485 WDR62O43379 1518 aa12.84□□□□□ -0.35
RPL41-203ENST00000546485 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
RPL41-203ENST00000546485 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
RPL41-203ENST00000546485 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
RPL41-203ENST00000546485 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
RPL41-203ENST00000546485 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
RPL41-203ENST00000546485 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
RPL41-203ENST00000546485 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
RPL41-203ENST00000546485 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
RPL41-203ENST00000546485 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
RPL41-203ENST00000546485 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
RPL41-203ENST00000546485 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
RPL41-203ENST00000546485 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
RPL41-203ENST00000546485 CFTRP13569 1480 aa12.54□□□□□ -0.4
RPL41-203ENST00000546485 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
RPL41-203ENST00000546485 WIZO95785 1651 aa12.51□□□□□ -0.41
RPL41-203ENST00000546485 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
RPL41-203ENST00000546485 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
RPL41-203ENST00000546485 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
RPL41-203ENST00000546485 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
RPL41-203ENST00000546485 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
RPL41-203ENST00000546485 AEBP2Q6ZN18 517 aaPredicted RBP12.38□□□□□ -0.43
RPL41-203ENST00000546485 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
RPL41-203ENST00000546485 CHD1O14646 1710 aa12.36□□□□□ -0.43
RPL41-203ENST00000546485 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
RPL41-203ENST00000546485 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
RPL41-203ENST00000546485 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.448e-42■■■■■ 77.3
RPL41-203ENST00000546485 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
RPL41-203ENST00000546485 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
RPL41-203ENST00000546485 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.44
RPL41-203ENST00000546485 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
RPL41-203ENST00000546485 FBLN2P98095 1184 aa12.2□□□□□ -0.46
RPL41-203ENST00000546485 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
RPL41-203ENST00000546485 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
RPL41-203ENST00000546485 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
RPL41-203ENST00000546485 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
RPL41-203ENST00000546485 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
RPL41-203ENST00000546485 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.46
RPL41-203ENST00000546485 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
RPL41-203ENST00000546485 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
RPL41-203ENST00000546485 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.47
RPL41-203ENST00000546485 SOGA1O94964 1423 aa12.07□□□□□ -0.48
RPL41-203ENST00000546485 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
RPL41-203ENST00000546485 ERCC6L2Q5T890 1561 aa12.06□□□□□ -0.48
RPL41-203ENST00000546485 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
RPL41-203ENST00000546485 SYNJ2O15056 1496 aa12.06□□□□□ -0.48
RPL41-203ENST00000546485 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
RPL41-203ENST00000546485 CHMP7Q8WUX9 453 aaPredicted RBP12.05□□□□□ -0.48
RPL41-203ENST00000546485 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
RPL41-203ENST00000546485 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
RPL41-203ENST00000546485 KIF13AQ9H1H9 1805 aa11.99□□□□□ -0.49
RPL41-203ENST00000546485 CUX1P39880 1505 aa11.98□□□□□ -0.49
RPL41-203ENST00000546485 CHIC1Q5VXU3 224 aa11.98□□□□□ -0.49
RPL41-203ENST00000546485 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
RPL41-203ENST00000546485 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
RPL41-203ENST00000546485 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
RPL41-203ENST00000546485 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
RPL41-203ENST00000546485 NUP160Q12769 1436 aa11.92□□□□□ -0.5
RPL41-203ENST00000546485 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
RPL41-203ENST00000546485 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
RPL41-203ENST00000546485 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
RPL41-203ENST00000546485 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
RPL41-203ENST00000546485 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
RPL41-203ENST00000546485 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
RPL41-203ENST00000546485 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
RPL41-203ENST00000546485 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms