RNA–Protein interactions for RNA: ENST00000546325.1

IFI35-208, Transcript of interferon induced protein 35, humanhuman

TSL 5

Gene IFI35, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFI35-208ENST00000546325 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
IFI35-208ENST00000546325 ABCC9O60706 1549 aa28.29■■■□□ 2.12
IFI35-208ENST00000546325 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
IFI35-208ENST00000546325 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
IFI35-208ENST00000546325 NACADO15069 1562 aa26.69■■□□□ 1.86
IFI35-208ENST00000546325 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
IFI35-208ENST00000546325 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
IFI35-208ENST00000546325 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
IFI35-208ENST00000546325 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
IFI35-208ENST00000546325 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
IFI35-208ENST00000546325 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
IFI35-208ENST00000546325 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
IFI35-208ENST00000546325 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
IFI35-208ENST00000546325 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
IFI35-208ENST00000546325 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
IFI35-208ENST00000546325 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
IFI35-208ENST00000546325 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
IFI35-208ENST00000546325 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
IFI35-208ENST00000546325 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
IFI35-208ENST00000546325 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
IFI35-208ENST00000546325 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
IFI35-208ENST00000546325 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
IFI35-208ENST00000546325 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
IFI35-208ENST00000546325 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
IFI35-208ENST00000546325 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
IFI35-208ENST00000546325 CUX2O14529 1486 aa24.36■■□□□ 1.49
IFI35-208ENST00000546325 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
IFI35-208ENST00000546325 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
IFI35-208ENST00000546325 NESP48681 1621 aa24.28■■□□□ 1.48
IFI35-208ENST00000546325 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
IFI35-208ENST00000546325 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
IFI35-208ENST00000546325 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
IFI35-208ENST00000546325 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
IFI35-208ENST00000546325 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
IFI35-208ENST00000546325 WIZO95785 1651 aa23.99■■□□□ 1.43
IFI35-208ENST00000546325 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
IFI35-208ENST00000546325 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
IFI35-208ENST00000546325 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
IFI35-208ENST00000546325 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
IFI35-208ENST00000546325 WDR62O43379 1518 aa23.69■■□□□ 1.38
IFI35-208ENST00000546325 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
IFI35-208ENST00000546325 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
IFI35-208ENST00000546325 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
IFI35-208ENST00000546325 CFTRP13569 1480 aa23.59■■□□□ 1.37
IFI35-208ENST00000546325 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
IFI35-208ENST00000546325 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
IFI35-208ENST00000546325 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
IFI35-208ENST00000546325 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
IFI35-208ENST00000546325 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
IFI35-208ENST00000546325 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
IFI35-208ENST00000546325 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
IFI35-208ENST00000546325 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
IFI35-208ENST00000546325 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
IFI35-208ENST00000546325 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
IFI35-208ENST00000546325 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
IFI35-208ENST00000546325 RIMBP3CA6NJZ7 1639 aa22.99■■□□□ 1.27
IFI35-208ENST00000546325 RIMBP3BA6NNM3 1639 aa22.99■■□□□ 1.27
IFI35-208ENST00000546325 RIMBP3Q9UFD9 1639 aa22.99■■□□□ 1.27
IFI35-208ENST00000546325 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
IFI35-208ENST00000546325 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
IFI35-208ENST00000546325 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
IFI35-208ENST00000546325 CHD1O14646 1710 aa22.94■■□□□ 1.26
IFI35-208ENST00000546325 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
IFI35-208ENST00000546325 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
IFI35-208ENST00000546325 FBLN2P98095 1184 aa22.85■■□□□ 1.25
IFI35-208ENST00000546325 SOGA1O94964 1423 aa22.83■■□□□ 1.25
IFI35-208ENST00000546325 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
IFI35-208ENST00000546325 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
IFI35-208ENST00000546325 CUX1P39880 1505 aa22.79■■□□□ 1.24
IFI35-208ENST00000546325 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
IFI35-208ENST00000546325 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
IFI35-208ENST00000546325 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
IFI35-208ENST00000546325 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
IFI35-208ENST00000546325 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
IFI35-208ENST00000546325 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
IFI35-208ENST00000546325 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
IFI35-208ENST00000546325 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
IFI35-208ENST00000546325 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
IFI35-208ENST00000546325 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
IFI35-208ENST00000546325 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
IFI35-208ENST00000546325 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
IFI35-208ENST00000546325 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
IFI35-208ENST00000546325 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
IFI35-208ENST00000546325 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
IFI35-208ENST00000546325 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
IFI35-208ENST00000546325 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
IFI35-208ENST00000546325 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
IFI35-208ENST00000546325 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
IFI35-208ENST00000546325 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
IFI35-208ENST00000546325 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
IFI35-208ENST00000546325 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
IFI35-208ENST00000546325 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
IFI35-208ENST00000546325 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
IFI35-208ENST00000546325 NUP160Q12769 1436 aa22.26■■□□□ 1.15
IFI35-208ENST00000546325 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
IFI35-208ENST00000546325 SHROOM2Q13796 1616 aa22.18■■□□□ 1.14
IFI35-208ENST00000546325 PRG4Q92954 1404 aaPredicted RBP22.07■■□□□ 1.12
IFI35-208ENST00000546325 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
IFI35-208ENST00000546325 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
IFI35-208ENST00000546325 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms