RNA–Protein interactions for RNA: ENST00000546310.1

PHOX2A-203, Transcript of paired like homeobox 2A, humanhuman

TSL 5

Gene PHOX2A, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-203ENST00000546310 NISCHQ9Y2I1 1504 aa63.74■■■■■ 7.79
PHOX2A-203ENST00000546310 ABCC9O60706 1549 aa58.3■■■■■ 6.92
PHOX2A-203ENST00000546310 CCDC180Q9P1Z9 1646 aa57.53■■■■■ 6.8
PHOX2A-203ENST00000546310 DNAJC5BQ9UF47 199 aa55.36■■■■■ 6.45
PHOX2A-203ENST00000546310 RB1CC1Q8TDY2 1594 aa55.14■■■■■ 6.42
PHOX2A-203ENST00000546310 NACADO15069 1562 aa54.58■■■■■ 6.33
PHOX2A-203ENST00000546310 PABPN1Q86U42 306 aaKnown RBP eCLIP54.15■■■■■ 6.26
PHOX2A-203ENST00000546310 DCAF8L2P0C7V8 631 aa54.14■■■■■ 6.26
PHOX2A-203ENST00000546310 UNC13AQ9UPW8 1703 aa53.85■■■■■ 6.21
PHOX2A-203ENST00000546310 MYO15BQ96JP2 1530 aa53.58■■■■■ 6.17
PHOX2A-203ENST00000546310 BICRAQ9NZM4 1560 aa53.57■■■■■ 6.17
PHOX2A-203ENST00000546310 SHROOM4Q9ULL8 1493 aa52.79■■■■■ 6.04
PHOX2A-203ENST00000546310 ZCCHC6Q5VYS8 1495 aaKnown RBP52.67■■■■■ 6.02
PHOX2A-203ENST00000546310 CC2D2AQ9P2K1 1620 aa52.61■■■■■ 6.01
PHOX2A-203ENST00000546310 DCAF1Q9Y4B6 1507 aa52.61■■■■■ 6.01
PHOX2A-203ENST00000546310 CECR2Q9BXF3 1484 aa52.6■■■■■ 6.01
PHOX2A-203ENST00000546310 SCRIBQ14160 1630 aa52.38■■■■■ 5.98
PHOX2A-203ENST00000546310 EIF4G1Q04637 1599 aaKnown RBP52.32■■■■■ 5.97
PHOX2A-203ENST00000546310 DNAJC5Q9H3Z4 198 aa51.41■■■■■ 5.82
PHOX2A-203ENST00000546310 CUX2O14529 1486 aa50.57■■■■■ 5.69
PHOX2A-203ENST00000546310 NCAPD3P42695 1498 aa50.4■■■■■ 5.66
PHOX2A-203ENST00000546310 ERCC6Q03468 1493 aa50.4■■■■■ 5.66
PHOX2A-203ENST00000546310 ATAD2BQ9ULI0 1458 aa50.14■■■■■ 5.62
PHOX2A-203ENST00000546310 SMARCA2P51531 1590 aa49.96■■■■■ 5.59
PHOX2A-203ENST00000546310 HMGXB3Q12766 1538 aa49.95■■■■■ 5.59
PHOX2A-203ENST00000546310 SMARCA4P51532 1647 aa49.89■■■■■ 5.58
PHOX2A-203ENST00000546310 NESP48681 1621 aa49.85■■■■■ 5.57
PHOX2A-203ENST00000546310 BAZ1BQ9UIG0 1483 aaKnown RBP49.62■■■■■ 5.53
PHOX2A-203ENST00000546310 BAZ1AQ9NRL2 1556 aaPredicted RBP49.53■■■■■ 5.52
PHOX2A-203ENST00000546310 THOC2Q8NI27 1593 aaKnown RBP49.5■■■■■ 5.52
PHOX2A-203ENST00000546310 PEG3Q9GZU2 1588 aa49.41■■■■■ 5.5
PHOX2A-203ENST00000546310 LAMC3Q9Y6N6 1575 aa49.38■■■■■ 5.5
PHOX2A-203ENST00000546310 KIF21AQ7Z4S6 1674 aa49.17■■■■■ 5.46
PHOX2A-203ENST00000546310 PDS5BQ9NTI5 1447 aa49.14■■■■■ 5.46
PHOX2A-203ENST00000546310 MROH2BQ7Z745 1585 aa49.11■■■■■ 5.45
PHOX2A-203ENST00000546310 TRIM41Q8WV44 630 aa48.84■■■■■ 5.41
PHOX2A-203ENST00000546310 CADPSQ9ULU8 1353 aa48.84■■■■■ 5.41
PHOX2A-203ENST00000546310 MRC2Q9UBG0 1479 aa48.77■■■■■ 5.4
PHOX2A-203ENST00000546310 WDR62O43379 1518 aa48.67■■■■■ 5.38
PHOX2A-203ENST00000546310 WIZO95785 1651 aa48.47■■■■■ 5.35
PHOX2A-203ENST00000546310 CEP164Q9UPV0 1460 aa48.42■■■■■ 5.34
PHOX2A-203ENST00000546310 FANCD2Q9BXW9 1451 aa48.29■■■■■ 5.32
PHOX2A-203ENST00000546310 CFTRP13569 1480 aa48.12■■■■■ 5.29
PHOX2A-203ENST00000546310 OSCARQ8IYS5 282 aa48.12■■■■■ 5.29
PHOX2A-203ENST00000546310 URB2Q14146 1524 aaKnown RBP47.94■■■■■ 5.26
PHOX2A-203ENST00000546310 TOP2AP11388 1531 aaKnown RBP47.82■■■■■ 5.25
PHOX2A-203ENST00000546310 RSF1Q96T23 1441 aaPredicted RBP47.81■■■■■ 5.24
PHOX2A-203ENST00000546310 RIMBP3CA6NJZ7 1639 aa47.58■■■■■ 5.21
PHOX2A-203ENST00000546310 RIMBP3BA6NNM3 1639 aa47.58■■■■■ 5.21
PHOX2A-203ENST00000546310 RIMBP3Q9UFD9 1639 aa47.58■■■■■ 5.21
PHOX2A-203ENST00000546310 PRDM2Q13029 1718 aa47.53■■■■■ 5.2
PHOX2A-203ENST00000546310 IFT140Q96RY7 1462 aa47.48■■■■■ 5.19
PHOX2A-203ENST00000546310 ZNF608Q9ULD9 1512 aaPredicted RBP47.47■■■■■ 5.19
PHOX2A-203ENST00000546310 ARHGEF11O15085 1522 aa47.36■■■■■ 5.17
PHOX2A-203ENST00000546310 TOPBP1Q92547 1522 aa47.29■■■■■ 5.16
PHOX2A-203ENST00000546310 CCDC88BA6NC98 1476 aa47.28■■■■■ 5.16
PHOX2A-203ENST00000546310 EIF4G3O43432 1585 aaKnown RBP47.16■■■■■ 5.14
PHOX2A-203ENST00000546310 ABCC8Q09428 1581 aa47.13■■■■■ 5.14
PHOX2A-203ENST00000546310 CYB5RLQ6IPT4 315 aa47.05■■■■■ 5.12
PHOX2A-203ENST00000546310 DNMBPQ6XZF7 1577 aa47.04■■■■■ 5.12
PHOX2A-203ENST00000546310 AQRO60306 1485 aaKnown RBP eCLIP46.95■■■■■ 5.11
PHOX2A-203ENST00000546310 CHD1O14646 1710 aa46.94■■■■■ 5.11
PHOX2A-203ENST00000546310 TARBP1Q13395 1621 aaKnown RBP46.91■■■■■ 5.1
PHOX2A-203ENST00000546310 ARAP1Q96P48 1450 aa46.84■■■■■ 5.09
PHOX2A-203ENST00000546310 FBLN2P98095 1184 aa46.8■■■■■ 5.08
PHOX2A-203ENST00000546310 TRHP20396 242 aaPredicted RBP46.79■■■■■ 5.08
PHOX2A-203ENST00000546310 POLA1P09884 1462 aaPredicted RBP46.76■■■■■ 5.08
PHOX2A-203ENST00000546310 RAD54L2Q9Y4B4 1467 aa46.6■■■■■ 5.05
PHOX2A-203ENST00000546310 TDRD9Q8NDG6 1382 aaKnown RBP46.54■■■■■ 5.04
PHOX2A-203ENST00000546310 SOGA1O94964 1423 aa46.53■■■■■ 5.04
PHOX2A-203ENST00000546310 SNAPC4Q5SXM2 1469 aa46.45■■■■■ 5.03
PHOX2A-203ENST00000546310 CLASP1Q7Z460 1538 aa46.42■■■■■ 5.02
PHOX2A-203ENST00000546310 WDR97A6NE52 1622 aa46.39■■■■■ 5.02
PHOX2A-203ENST00000546310 FGD5Q6ZNL6 1462 aa46.36■■■■■ 5.01
PHOX2A-203ENST00000546310 CHMP7Q8WUX9 453 aaPredicted RBP46.33■■■■■ 5.01
PHOX2A-203ENST00000546310 SYNJ1O43426 1573 aa46.32■■■■■ 5.01
PHOX2A-203ENST00000546310 MAGI1Q96QZ7 1491 aaPredicted RBP46.3■■■■■ 5
PHOX2A-203ENST00000546310 GRIN2BQ13224 1484 aa46.22■■■■■ 4.99
PHOX2A-203ENST00000546310 CUX1P39880 1505 aa46.18■■■■■ 4.98
PHOX2A-203ENST00000546310 SYNJ2O15056 1496 aa46.16■■■■■ 4.98
PHOX2A-203ENST00000546310 AEBP2Q6ZN18 517 aaPredicted RBP45.99■■■■■ 4.95
PHOX2A-203ENST00000546310 GAPVD1Q14C86 1478 aa45.98■■■■■ 4.95
PHOX2A-203ENST00000546310 PBRM1Q86U86 1689 aa45.95■■■■■ 4.95
PHOX2A-203ENST00000546310 ABCA10Q8WWZ4 1543 aa45.78■■■■■ 4.92
PHOX2A-203ENST00000546310 ABCA5Q8WWZ7 1642 aa45.77■■■■■ 4.92
PHOX2A-203ENST00000546310 ERCC6L2Q5T890 1561 aa45.62■■■■■ 4.89
PHOX2A-203ENST00000546310 GRIN2AQ12879 1464 aa45.62■■■■■ 4.89
PHOX2A-203ENST00000546310 CEP170Q5SW79 1584 aa45.51■■■■■ 4.88
PHOX2A-203ENST00000546310 NUP160Q12769 1436 aa45.51■■■■■ 4.88
PHOX2A-203ENST00000546310 ADAMTS12P58397 1594 aa45.5■■■■■ 4.87
PHOX2A-203ENST00000546310 WRNQ14191 1432 aaPredicted RBP eCLIP45.45■■■■■ 4.87
PHOX2A-203ENST00000546310 SHROOM2Q13796 1616 aa45.37■■■■■ 4.85
PHOX2A-203ENST00000546310 FHAD1B1AJZ9 1412 aa45.35■■■■■ 4.85
PHOX2A-203ENST00000546310 TOP2BQ02880 1626 aa45.23■■■■■ 4.83
PHOX2A-203ENST00000546310 BIVM-ERCC5R4GMW8 1640 aa45.23■■■■■ 4.83
PHOX2A-203ENST00000546310 ERICH3Q5RHP9 1530 aa45.19■■■■■ 4.82
PHOX2A-203ENST00000546310 KIF13AQ9H1H9 1805 aa45.16■■■■■ 4.82
PHOX2A-203ENST00000546310 PRG4Q92954 1404 aaPredicted RBP45.13■■■■■ 4.82
PHOX2A-203ENST00000546310 SUPT5HO00267 1087 aaKnown RBP45.12■■■■■ 4.81
PHOX2A-203ENST00000546310 JPH4Q96JJ6 628 aa45.02■■■■■ 4.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms