RNA–Protein interactions for RNA: ENST00000546255.1

FERMT3-209, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-209ENST00000546255 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
FERMT3-209ENST00000546255 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
FERMT3-209ENST00000546255 ABCC9O60706 1549 aa33.81■■■■□ 3
FERMT3-209ENST00000546255 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
FERMT3-209ENST00000546255 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
FERMT3-209ENST00000546255 NACADO15069 1562 aa32.05■■■□□ 2.72
FERMT3-209ENST00000546255 MYO15BQ96JP2 1530 aa31.64■■■□□ 2.66
FERMT3-209ENST00000546255 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
FERMT3-209ENST00000546255 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
FERMT3-209ENST00000546255 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
FERMT3-209ENST00000546255 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
FERMT3-209ENST00000546255 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
FERMT3-209ENST00000546255 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
FERMT3-209ENST00000546255 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
FERMT3-209ENST00000546255 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
FERMT3-209ENST00000546255 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
FERMT3-209ENST00000546255 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
FERMT3-209ENST00000546255 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
FERMT3-209ENST00000546255 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
FERMT3-209ENST00000546255 ATAD2BQ9ULI0 1458 aa29.56■■■□□ 2.32
FERMT3-209ENST00000546255 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
FERMT3-209ENST00000546255 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
FERMT3-209ENST00000546255 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
FERMT3-209ENST00000546255 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
FERMT3-209ENST00000546255 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
FERMT3-209ENST00000546255 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
FERMT3-209ENST00000546255 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
FERMT3-209ENST00000546255 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
FERMT3-209ENST00000546255 NESP48681 1621 aa29.09■■■□□ 2.25
FERMT3-209ENST00000546255 CUX2O14529 1486 aa28.99■■■□□ 2.23
FERMT3-209ENST00000546255 WIZO95785 1651 aa28.91■■■□□ 2.22
FERMT3-209ENST00000546255 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
FERMT3-209ENST00000546255 RSF1Q96T23 1441 aaPredicted RBP28.79■■■□□ 2.2
FERMT3-209ENST00000546255 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
FERMT3-209ENST00000546255 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
FERMT3-209ENST00000546255 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
FERMT3-209ENST00000546255 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
FERMT3-209ENST00000546255 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
FERMT3-209ENST00000546255 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
FERMT3-209ENST00000546255 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
FERMT3-209ENST00000546255 CFTRP13569 1480 aa28.45■■■□□ 2.14
FERMT3-209ENST00000546255 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
FERMT3-209ENST00000546255 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
FERMT3-209ENST00000546255 WDR62O43379 1518 aa28.35■■■□□ 2.13
FERMT3-209ENST00000546255 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
FERMT3-209ENST00000546255 URB2Q14146 1524 aaKnown RBP28.14■■■□□ 2.1
FERMT3-209ENST00000546255 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
FERMT3-209ENST00000546255 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
FERMT3-209ENST00000546255 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
FERMT3-209ENST00000546255 ABCC8Q09428 1581 aa27.87■■■□□ 2.05
FERMT3-209ENST00000546255 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
FERMT3-209ENST00000546255 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
FERMT3-209ENST00000546255 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
FERMT3-209ENST00000546255 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
FERMT3-209ENST00000546255 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
FERMT3-209ENST00000546255 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
FERMT3-209ENST00000546255 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.011e-6■■□□□ 13.8
FERMT3-209ENST00000546255 EIF4G3O43432 1585 aaKnown RBP27.58■■■□□ 2.01
FERMT3-209ENST00000546255 SOGA1O94964 1423 aa27.58■■■□□ 2
FERMT3-209ENST00000546255 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
FERMT3-209ENST00000546255 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
FERMT3-209ENST00000546255 FBLN2P98095 1184 aa27.51■■□□□ 1.99
FERMT3-209ENST00000546255 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
FERMT3-209ENST00000546255 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
FERMT3-209ENST00000546255 CUX1P39880 1505 aa27.49■■□□□ 1.99
FERMT3-209ENST00000546255 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
FERMT3-209ENST00000546255 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
FERMT3-209ENST00000546255 CHD1O14646 1710 aa27.3■■□□□ 1.96
FERMT3-209ENST00000546255 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
FERMT3-209ENST00000546255 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
FERMT3-209ENST00000546255 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
FERMT3-209ENST00000546255 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
FERMT3-209ENST00000546255 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
FERMT3-209ENST00000546255 ARHGEF11O15085 1522 aa27.26■■□□□ 1.96
FERMT3-209ENST00000546255 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
FERMT3-209ENST00000546255 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
FERMT3-209ENST00000546255 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
FERMT3-209ENST00000546255 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
FERMT3-209ENST00000546255 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
FERMT3-209ENST00000546255 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
FERMT3-209ENST00000546255 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
FERMT3-209ENST00000546255 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
FERMT3-209ENST00000546255 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
FERMT3-209ENST00000546255 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
FERMT3-209ENST00000546255 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
FERMT3-209ENST00000546255 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
FERMT3-209ENST00000546255 ARAP1Q96P48 1450 aa27■■□□□ 1.91
FERMT3-209ENST00000546255 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
FERMT3-209ENST00000546255 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
FERMT3-209ENST00000546255 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
FERMT3-209ENST00000546255 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
FERMT3-209ENST00000546255 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
FERMT3-209ENST00000546255 NUP160Q12769 1436 aa26.78■■□□□ 1.88
FERMT3-209ENST00000546255 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
FERMT3-209ENST00000546255 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
FERMT3-209ENST00000546255 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.86
FERMT3-209ENST00000546255 IGF1RP08069 1367 aa26.62■■□□□ 1.85
FERMT3-209ENST00000546255 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
FERMT3-209ENST00000546255 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
FERMT3-209ENST00000546255 SHROOM2Q13796 1616 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms