RNA–Protein interactions for RNA: ENST00000546167.5

LRTM2-212, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-212ENST00000546167 NISCHQ9Y2I1 1504 aa39.82■■■■□ 3.97
LRTM2-212ENST00000546167 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
LRTM2-212ENST00000546167 ABCC9O60706 1549 aa34.92■■■■□ 3.18
LRTM2-212ENST00000546167 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
LRTM2-212ENST00000546167 NACADO15069 1562 aa33.42■■■□□ 2.94
LRTM2-212ENST00000546167 DCAF8L2P0C7V8 631 aa33.29■■■□□ 2.92
LRTM2-212ENST00000546167 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
LRTM2-212ENST00000546167 MYO15BQ96JP2 1530 aa33.12■■■□□ 2.89
LRTM2-212ENST00000546167 DCAF1Q9Y4B6 1507 aa32.93■■■□□ 2.86
LRTM2-212ENST00000546167 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
LRTM2-212ENST00000546167 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
LRTM2-212ENST00000546167 BICRAQ9NZM4 1560 aa32.48■■■□□ 2.79
LRTM2-212ENST00000546167 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
LRTM2-212ENST00000546167 SHROOM4Q9ULL8 1493 aa32.17■■■□□ 2.74
LRTM2-212ENST00000546167 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
LRTM2-212ENST00000546167 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
LRTM2-212ENST00000546167 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
LRTM2-212ENST00000546167 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
LRTM2-212ENST00000546167 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
LRTM2-212ENST00000546167 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
LRTM2-212ENST00000546167 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
LRTM2-212ENST00000546167 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
LRTM2-212ENST00000546167 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
LRTM2-212ENST00000546167 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
LRTM2-212ENST00000546167 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
LRTM2-212ENST00000546167 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
LRTM2-212ENST00000546167 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
LRTM2-212ENST00000546167 WIZO95785 1651 aa30.39■■■□□ 2.45
LRTM2-212ENST00000546167 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
LRTM2-212ENST00000546167 NESP48681 1621 aa30.15■■■□□ 2.42
LRTM2-212ENST00000546167 ERCC6Q03468 1493 aa30.15■■■□□ 2.42
LRTM2-212ENST00000546167 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
LRTM2-212ENST00000546167 TOP2AP11388 1531 aaKnown RBP30.07■■■□□ 2.4
LRTM2-212ENST00000546167 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
LRTM2-212ENST00000546167 CUX2O14529 1486 aa29.86■■■□□ 2.37
LRTM2-212ENST00000546167 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
LRTM2-212ENST00000546167 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
LRTM2-212ENST00000546167 THOC2Q8NI27 1593 aaKnown RBP29.8■■■□□ 2.36
LRTM2-212ENST00000546167 CFTRP13569 1480 aa29.69■■■□□ 2.34
LRTM2-212ENST00000546167 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
LRTM2-212ENST00000546167 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
LRTM2-212ENST00000546167 FANCD2Q9BXW9 1451 aa29.6■■■□□ 2.33
LRTM2-212ENST00000546167 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
LRTM2-212ENST00000546167 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
LRTM2-212ENST00000546167 WDR62O43379 1518 aa29.51■■■□□ 2.32
LRTM2-212ENST00000546167 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
LRTM2-212ENST00000546167 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
LRTM2-212ENST00000546167 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
LRTM2-212ENST00000546167 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
LRTM2-212ENST00000546167 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
LRTM2-212ENST00000546167 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
LRTM2-212ENST00000546167 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
LRTM2-212ENST00000546167 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
LRTM2-212ENST00000546167 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
LRTM2-212ENST00000546167 CUX1P39880 1505 aa28.82■■■□□ 2.2
LRTM2-212ENST00000546167 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
LRTM2-212ENST00000546167 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
LRTM2-212ENST00000546167 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
LRTM2-212ENST00000546167 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
LRTM2-212ENST00000546167 SOGA1O94964 1423 aa28.68■■■□□ 2.18
LRTM2-212ENST00000546167 AQRO60306 1485 aaKnown RBP eCLIP28.63■■■□□ 2.17
LRTM2-212ENST00000546167 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
LRTM2-212ENST00000546167 WRNQ14191 1432 aaPredicted RBP eCLIP28.57■■■□□ 2.16
LRTM2-212ENST00000546167 BIVM-ERCC5R4GMW8 1640 aa28.56■■■□□ 2.16
LRTM2-212ENST00000546167 TOP2BQ02880 1626 aa28.54■■■□□ 2.16
LRTM2-212ENST00000546167 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
LRTM2-212ENST00000546167 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
LRTM2-212ENST00000546167 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
LRTM2-212ENST00000546167 CHD1O14646 1710 aa28.46■■■□□ 2.15
LRTM2-212ENST00000546167 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
LRTM2-212ENST00000546167 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
LRTM2-212ENST00000546167 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
LRTM2-212ENST00000546167 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
LRTM2-212ENST00000546167 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
LRTM2-212ENST00000546167 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
LRTM2-212ENST00000546167 MAGI1Q96QZ7 1491 aaPredicted RBP28.37■■■□□ 2.13
LRTM2-212ENST00000546167 FBLN2P98095 1184 aa28.32■■■□□ 2.12
LRTM2-212ENST00000546167 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
LRTM2-212ENST00000546167 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
LRTM2-212ENST00000546167 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
LRTM2-212ENST00000546167 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
LRTM2-212ENST00000546167 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
LRTM2-212ENST00000546167 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
LRTM2-212ENST00000546167 ARHGEF11O15085 1522 aa28.15■■■□□ 2.1
LRTM2-212ENST00000546167 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
LRTM2-212ENST00000546167 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
LRTM2-212ENST00000546167 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
LRTM2-212ENST00000546167 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
LRTM2-212ENST00000546167 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
LRTM2-212ENST00000546167 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
LRTM2-212ENST00000546167 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
LRTM2-212ENST00000546167 NUP160Q12769 1436 aa27.92■■■□□ 2.06
LRTM2-212ENST00000546167 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
LRTM2-212ENST00000546167 CUL7Q14999 1698 aa27.89■■■□□ 2.06
LRTM2-212ENST00000546167 CYB5RLQ6IPT4 315 aa27.8■■■□□ 2.04
LRTM2-212ENST00000546167 IGF1RP08069 1367 aa27.8■■■□□ 2.04
LRTM2-212ENST00000546167 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
LRTM2-212ENST00000546167 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
LRTM2-212ENST00000546167 ERCC6L2Q5T890 1561 aa27.7■■■□□ 2.03
LRTM2-212ENST00000546167 CARMIL1Q5VZK9 1371 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms