RNA–Protein interactions for RNA: ENST00000546153.1

TMEM52B-206, Transcript of transmembrane protein 52B, humanhuman

TSL 4

Gene TMEM52B, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM52B-206ENST00000546153 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
TMEM52B-206ENST00000546153 ABCC9O60706 1549 aa23.74■■□□□ 1.39
TMEM52B-206ENST00000546153 CCDC180Q9P1Z9 1646 aa23.07■■□□□ 1.28
TMEM52B-206ENST00000546153 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
TMEM52B-206ENST00000546153 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
TMEM52B-206ENST00000546153 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
TMEM52B-206ENST00000546153 NACADO15069 1562 aa21.95■■□□□ 1.1
TMEM52B-206ENST00000546153 UNC13AQ9UPW8 1703 aa21.85■■□□□ 1.09
TMEM52B-206ENST00000546153 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
TMEM52B-206ENST00000546153 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
TMEM52B-206ENST00000546153 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
TMEM52B-206ENST00000546153 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
TMEM52B-206ENST00000546153 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
TMEM52B-206ENST00000546153 DNAJC5Q9H3Z4 198 aa21.33■■□□□ 1.01
TMEM52B-206ENST00000546153 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
TMEM52B-206ENST00000546153 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
TMEM52B-206ENST00000546153 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
TMEM52B-206ENST00000546153 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
TMEM52B-206ENST00000546153 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
TMEM52B-206ENST00000546153 CUX2O14529 1486 aa20.62■□□□□ 0.89
TMEM52B-206ENST00000546153 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
TMEM52B-206ENST00000546153 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
TMEM52B-206ENST00000546153 NESP48681 1621 aa20.24■□□□□ 0.83
TMEM52B-206ENST00000546153 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
TMEM52B-206ENST00000546153 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
TMEM52B-206ENST00000546153 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
TMEM52B-206ENST00000546153 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
TMEM52B-206ENST00000546153 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
TMEM52B-206ENST00000546153 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
TMEM52B-206ENST00000546153 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
TMEM52B-206ENST00000546153 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
TMEM52B-206ENST00000546153 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
TMEM52B-206ENST00000546153 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
TMEM52B-206ENST00000546153 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
TMEM52B-206ENST00000546153 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
TMEM52B-206ENST00000546153 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
TMEM52B-206ENST00000546153 WDR62O43379 1518 aa19.67■□□□□ 0.74
TMEM52B-206ENST00000546153 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
TMEM52B-206ENST00000546153 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
TMEM52B-206ENST00000546153 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
TMEM52B-206ENST00000546153 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
TMEM52B-206ENST00000546153 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
TMEM52B-206ENST00000546153 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
TMEM52B-206ENST00000546153 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
TMEM52B-206ENST00000546153 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
TMEM52B-206ENST00000546153 WIZO95785 1651 aa19.4■□□□□ 0.7
TMEM52B-206ENST00000546153 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
TMEM52B-206ENST00000546153 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
TMEM52B-206ENST00000546153 CFTRP13569 1480 aa19.29■□□□□ 0.68
TMEM52B-206ENST00000546153 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
TMEM52B-206ENST00000546153 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
TMEM52B-206ENST00000546153 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
TMEM52B-206ENST00000546153 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
TMEM52B-206ENST00000546153 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
TMEM52B-206ENST00000546153 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
TMEM52B-206ENST00000546153 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
TMEM52B-206ENST00000546153 CHD1O14646 1710 aa19.05■□□□□ 0.64
TMEM52B-206ENST00000546153 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
TMEM52B-206ENST00000546153 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
TMEM52B-206ENST00000546153 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
TMEM52B-206ENST00000546153 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
TMEM52B-206ENST00000546153 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
TMEM52B-206ENST00000546153 FBLN2P98095 1184 aa18.94■□□□□ 0.62
TMEM52B-206ENST00000546153 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
TMEM52B-206ENST00000546153 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
TMEM52B-206ENST00000546153 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
TMEM52B-206ENST00000546153 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
TMEM52B-206ENST00000546153 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
TMEM52B-206ENST00000546153 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
TMEM52B-206ENST00000546153 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
TMEM52B-206ENST00000546153 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
TMEM52B-206ENST00000546153 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
TMEM52B-206ENST00000546153 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
TMEM52B-206ENST00000546153 SOGA1O94964 1423 aa18.67■□□□□ 0.58
TMEM52B-206ENST00000546153 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
TMEM52B-206ENST00000546153 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
TMEM52B-206ENST00000546153 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
TMEM52B-206ENST00000546153 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
TMEM52B-206ENST00000546153 WDR97A6NE52 1622 aa18.57■□□□□ 0.56
TMEM52B-206ENST00000546153 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
TMEM52B-206ENST00000546153 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
TMEM52B-206ENST00000546153 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
TMEM52B-206ENST00000546153 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
TMEM52B-206ENST00000546153 CUX1P39880 1505 aa18.49■□□□□ 0.55
TMEM52B-206ENST00000546153 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
TMEM52B-206ENST00000546153 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
TMEM52B-206ENST00000546153 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
TMEM52B-206ENST00000546153 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
TMEM52B-206ENST00000546153 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
TMEM52B-206ENST00000546153 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
TMEM52B-206ENST00000546153 NUP160Q12769 1436 aa18.3■□□□□ 0.52
TMEM52B-206ENST00000546153 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
TMEM52B-206ENST00000546153 KDM4FA0A1W2PPD8 638 aa18.28■□□□□ 0.52
TMEM52B-206ENST00000546153 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
TMEM52B-206ENST00000546153 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
TMEM52B-206ENST00000546153 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
TMEM52B-206ENST00000546153 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
TMEM52B-206ENST00000546153 DIP2BQ9P265 1576 aa18.16■□□□□ 0.5
TMEM52B-206ENST00000546153 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
TMEM52B-206ENST00000546153 KDM6BO15054 1643 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms