RNA–Protein interactions for RNA: ENST00000545928.5

LDLRAD1-204, Transcript of low density lipoprotein receptor class A domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLRAD1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1-204ENST00000545928 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
LDLRAD1-204ENST00000545928 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
LDLRAD1-204ENST00000545928 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
LDLRAD1-204ENST00000545928 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
LDLRAD1-204ENST00000545928 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
LDLRAD1-204ENST00000545928 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
LDLRAD1-204ENST00000545928 ABCC9O60706 1549 aa22.43■■□□□ 1.18
LDLRAD1-204ENST00000545928 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
LDLRAD1-204ENST00000545928 NACADO15069 1562 aa22.11■■□□□ 1.13
LDLRAD1-204ENST00000545928 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
LDLRAD1-204ENST00000545928 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
LDLRAD1-204ENST00000545928 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
LDLRAD1-204ENST00000545928 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
LDLRAD1-204ENST00000545928 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
LDLRAD1-204ENST00000545928 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
LDLRAD1-204ENST00000545928 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
LDLRAD1-204ENST00000545928 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
LDLRAD1-204ENST00000545928 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
LDLRAD1-204ENST00000545928 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
LDLRAD1-204ENST00000545928 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
LDLRAD1-204ENST00000545928 WIZO95785 1651 aa20.98■□□□□ 0.95
LDLRAD1-204ENST00000545928 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
LDLRAD1-204ENST00000545928 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
LDLRAD1-204ENST00000545928 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
LDLRAD1-204ENST00000545928 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
LDLRAD1-204ENST00000545928 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
LDLRAD1-204ENST00000545928 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
LDLRAD1-204ENST00000545928 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
LDLRAD1-204ENST00000545928 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
LDLRAD1-204ENST00000545928 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
LDLRAD1-204ENST00000545928 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
LDLRAD1-204ENST00000545928 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
LDLRAD1-204ENST00000545928 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
LDLRAD1-204ENST00000545928 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
LDLRAD1-204ENST00000545928 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
LDLRAD1-204ENST00000545928 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
LDLRAD1-204ENST00000545928 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
LDLRAD1-204ENST00000545928 CFTRP13569 1480 aa20.06■□□□□ 0.8
LDLRAD1-204ENST00000545928 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
LDLRAD1-204ENST00000545928 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
LDLRAD1-204ENST00000545928 SOGA1O94964 1423 aa19.94■□□□□ 0.78
LDLRAD1-204ENST00000545928 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
LDLRAD1-204ENST00000545928 EEA1Q15075 1411 aa19.9■□□□□ 0.78
LDLRAD1-204ENST00000545928 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
LDLRAD1-204ENST00000545928 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
LDLRAD1-204ENST00000545928 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
LDLRAD1-204ENST00000545928 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
LDLRAD1-204ENST00000545928 CUX1P39880 1505 aa19.79■□□□□ 0.76
LDLRAD1-204ENST00000545928 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
LDLRAD1-204ENST00000545928 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
LDLRAD1-204ENST00000545928 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
LDLRAD1-204ENST00000545928 NESP48681 1621 aa19.73■□□□□ 0.75
LDLRAD1-204ENST00000545928 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
LDLRAD1-204ENST00000545928 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
LDLRAD1-204ENST00000545928 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
LDLRAD1-204ENST00000545928 GOLGA3Q08378 1498 aa19.63■□□□□ 0.73
LDLRAD1-204ENST00000545928 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
LDLRAD1-204ENST00000545928 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
LDLRAD1-204ENST00000545928 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
LDLRAD1-204ENST00000545928 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
LDLRAD1-204ENST00000545928 KIF21BO75037 1637 aa19.55■□□□□ 0.72
LDLRAD1-204ENST00000545928 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
LDLRAD1-204ENST00000545928 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.72
LDLRAD1-204ENST00000545928 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
LDLRAD1-204ENST00000545928 CUX2O14529 1486 aa19.51■□□□□ 0.71
LDLRAD1-204ENST00000545928 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
LDLRAD1-204ENST00000545928 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
LDLRAD1-204ENST00000545928 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
LDLRAD1-204ENST00000545928 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
LDLRAD1-204ENST00000545928 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
LDLRAD1-204ENST00000545928 IGF1RP08069 1367 aa19.45■□□□□ 0.7
LDLRAD1-204ENST00000545928 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
LDLRAD1-204ENST00000545928 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
LDLRAD1-204ENST00000545928 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
LDLRAD1-204ENST00000545928 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
LDLRAD1-204ENST00000545928 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
LDLRAD1-204ENST00000545928 CLIP1P30622 1438 aa19.36■□□□□ 0.69
LDLRAD1-204ENST00000545928 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
LDLRAD1-204ENST00000545928 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
LDLRAD1-204ENST00000545928 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
LDLRAD1-204ENST00000545928 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
LDLRAD1-204ENST00000545928 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.67
LDLRAD1-204ENST00000545928 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
LDLRAD1-204ENST00000545928 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
LDLRAD1-204ENST00000545928 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
LDLRAD1-204ENST00000545928 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
LDLRAD1-204ENST00000545928 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
LDLRAD1-204ENST00000545928 WDR62O43379 1518 aa19.15■□□□□ 0.66
LDLRAD1-204ENST00000545928 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
LDLRAD1-204ENST00000545928 APLP2Q06481 763 aa19.13■□□□□ 0.65
LDLRAD1-204ENST00000545928 CUL7Q14999 1698 aa19.12■□□□□ 0.65
LDLRAD1-204ENST00000545928 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
LDLRAD1-204ENST00000545928 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
LDLRAD1-204ENST00000545928 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.65
LDLRAD1-204ENST00000545928 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
LDLRAD1-204ENST00000545928 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
LDLRAD1-204ENST00000545928 HRCP23327 699 aa19.04■□□□□ 0.64
LDLRAD1-204ENST00000545928 GRIN2BQ13224 1484 aa19.02■□□□□ 0.63
LDLRAD1-204ENST00000545928 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
LDLRAD1-204ENST00000545928 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms