RNA–Protein interactions for RNA: ENST00000545912.1

AP000820.1-201, humanhuman

TSL 3 BASIC

Gene AP000820.1, Length 506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000820.1-201ENST00000545912 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
AP000820.1-201ENST00000545912 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
AP000820.1-201ENST00000545912 ABCC9O60706 1549 aa18.26■□□□□ 0.51
AP000820.1-201ENST00000545912 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
AP000820.1-201ENST00000545912 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
AP000820.1-201ENST00000545912 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
AP000820.1-201ENST00000545912 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
AP000820.1-201ENST00000545912 NACADO15069 1562 aa17.59■□□□□ 0.41
AP000820.1-201ENST00000545912 MYO15BQ96JP2 1530 aa17.49■□□□□ 0.39
AP000820.1-201ENST00000545912 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
AP000820.1-201ENST00000545912 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
AP000820.1-201ENST00000545912 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
AP000820.1-201ENST00000545912 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
AP000820.1-201ENST00000545912 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
AP000820.1-201ENST00000545912 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
AP000820.1-201ENST00000545912 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
AP000820.1-201ENST00000545912 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
AP000820.1-201ENST00000545912 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
AP000820.1-201ENST00000545912 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
AP000820.1-201ENST00000545912 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
AP000820.1-201ENST00000545912 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
AP000820.1-201ENST00000545912 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
AP000820.1-201ENST00000545912 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
AP000820.1-201ENST00000545912 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
AP000820.1-201ENST00000545912 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
AP000820.1-201ENST00000545912 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
AP000820.1-201ENST00000545912 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
AP000820.1-201ENST00000545912 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
AP000820.1-201ENST00000545912 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
AP000820.1-201ENST00000545912 WIZO95785 1651 aa16.02■□□□□ 0.16
AP000820.1-201ENST00000545912 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
AP000820.1-201ENST00000545912 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
AP000820.1-201ENST00000545912 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
AP000820.1-201ENST00000545912 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
AP000820.1-201ENST00000545912 NESP48681 1621 aa15.79■□□□□ 0.12
AP000820.1-201ENST00000545912 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
AP000820.1-201ENST00000545912 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
AP000820.1-201ENST00000545912 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
AP000820.1-201ENST00000545912 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
AP000820.1-201ENST00000545912 CFTRP13569 1480 aa15.65■□□□□ 0.1
AP000820.1-201ENST00000545912 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
AP000820.1-201ENST00000545912 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
AP000820.1-201ENST00000545912 CUX2O14529 1486 aa15.6■□□□□ 0.09
AP000820.1-201ENST00000545912 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
AP000820.1-201ENST00000545912 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
AP000820.1-201ENST00000545912 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
AP000820.1-201ENST00000545912 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
AP000820.1-201ENST00000545912 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.07
AP000820.1-201ENST00000545912 WDR62O43379 1518 aa15.45■□□□□ 0.06
AP000820.1-201ENST00000545912 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
AP000820.1-201ENST00000545912 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
AP000820.1-201ENST00000545912 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
AP000820.1-201ENST00000545912 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
AP000820.1-201ENST00000545912 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
AP000820.1-201ENST00000545912 CUX1P39880 1505 aa15.17■□□□□ 0.02
AP000820.1-201ENST00000545912 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
AP000820.1-201ENST00000545912 SOGA1O94964 1423 aa15.14■□□□□ 0.01
AP000820.1-201ENST00000545912 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
AP000820.1-201ENST00000545912 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
AP000820.1-201ENST00000545912 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
AP000820.1-201ENST00000545912 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
AP000820.1-201ENST00000545912 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
AP000820.1-201ENST00000545912 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
AP000820.1-201ENST00000545912 TOP2BQ02880 1626 aa15.07■□□□□ 0
AP000820.1-201ENST00000545912 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
AP000820.1-201ENST00000545912 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
AP000820.1-201ENST00000545912 WDR97A6NE52 1622 aa15.06■□□□□ 0
AP000820.1-201ENST00000545912 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -0
AP000820.1-201ENST00000545912 SYNJ1O43426 1573 aa15.03■□□□□ -0
AP000820.1-201ENST00000545912 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
AP000820.1-201ENST00000545912 OSCARQ8IYS5 282 aa15□□□□□ -0.01
AP000820.1-201ENST00000545912 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
AP000820.1-201ENST00000545912 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
AP000820.1-201ENST00000545912 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
AP000820.1-201ENST00000545912 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
AP000820.1-201ENST00000545912 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
AP000820.1-201ENST00000545912 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
AP000820.1-201ENST00000545912 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
AP000820.1-201ENST00000545912 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
AP000820.1-201ENST00000545912 FBLN2P98095 1184 aa14.91□□□□□ -0.02
AP000820.1-201ENST00000545912 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
AP000820.1-201ENST00000545912 CHD1O14646 1710 aa14.9□□□□□ -0.02
AP000820.1-201ENST00000545912 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
AP000820.1-201ENST00000545912 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
AP000820.1-201ENST00000545912 ERICH3Q5RHP9 1530 aa14.84□□□□□ -0.03
AP000820.1-201ENST00000545912 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
AP000820.1-201ENST00000545912 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
AP000820.1-201ENST00000545912 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
AP000820.1-201ENST00000545912 ADAMTS12P58397 1594 aa14.77□□□□□ -0.04
AP000820.1-201ENST00000545912 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
AP000820.1-201ENST00000545912 IGF1RP08069 1367 aa14.73□□□□□ -0.05
AP000820.1-201ENST00000545912 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.05
AP000820.1-201ENST00000545912 CUL7Q14999 1698 aa14.71□□□□□ -0.05
AP000820.1-201ENST00000545912 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
AP000820.1-201ENST00000545912 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
AP000820.1-201ENST00000545912 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
AP000820.1-201ENST00000545912 ARHGEF11O15085 1522 aa14.69□□□□□ -0.06
AP000820.1-201ENST00000545912 NUP160Q12769 1436 aa14.67□□□□□ -0.06
AP000820.1-201ENST00000545912 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
AP000820.1-201ENST00000545912 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms