RNA–Protein interactions for RNA: ENST00000545896.1

FERMT3-208, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-208ENST00000545896 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
FERMT3-208ENST00000545896 ABCC9O60706 1549 aa38.48■■■■□ 3.75
FERMT3-208ENST00000545896 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
FERMT3-208ENST00000545896 DNAJC5BQ9UF47 199 aa36.59■■■■□ 3.45
FERMT3-208ENST00000545896 RB1CC1Q8TDY2 1594 aa36.35■■■■□ 3.41
FERMT3-208ENST00000545896 NACADO15069 1562 aa35.93■■■■□ 3.34
FERMT3-208ENST00000545896 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
FERMT3-208ENST00000545896 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.32
FERMT3-208ENST00000545896 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
FERMT3-208ENST00000545896 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
FERMT3-208ENST00000545896 MYO15BQ96JP2 1530 aa35.21■■■■□ 3.23
FERMT3-208ENST00000545896 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
FERMT3-208ENST00000545896 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
FERMT3-208ENST00000545896 CC2D2AQ9P2K1 1620 aa34.7■■■■□ 3.14
FERMT3-208ENST00000545896 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
FERMT3-208ENST00000545896 DCAF1Q9Y4B6 1507 aa34.55■■■■□ 3.12
FERMT3-208ENST00000545896 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
FERMT3-208ENST00000545896 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
FERMT3-208ENST00000545896 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
FERMT3-208ENST00000545896 CUX2O14529 1486 aa33.38■■■□□ 2.93
FERMT3-208ENST00000545896 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
FERMT3-208ENST00000545896 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
FERMT3-208ENST00000545896 ATAD2BQ9ULI0 1458 aa33■■■□□ 2.87
FERMT3-208ENST00000545896 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
FERMT3-208ENST00000545896 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
FERMT3-208ENST00000545896 NESP48681 1621 aa32.86■■■□□ 2.85
FERMT3-208ENST00000545896 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
FERMT3-208ENST00000545896 BAZ1BQ9UIG0 1483 aaKnown RBP32.68■■■□□ 2.82
FERMT3-208ENST00000545896 THOC2Q8NI27 1593 aaKnown RBP32.61■■■□□ 2.81
FERMT3-208ENST00000545896 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
FERMT3-208ENST00000545896 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
FERMT3-208ENST00000545896 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
FERMT3-208ENST00000545896 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
FERMT3-208ENST00000545896 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
FERMT3-208ENST00000545896 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
FERMT3-208ENST00000545896 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
FERMT3-208ENST00000545896 CADPSQ9ULU8 1353 aa32.18■■■□□ 2.74
FERMT3-208ENST00000545896 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
FERMT3-208ENST00000545896 WDR62O43379 1518 aa32.05■■■□□ 2.72
FERMT3-208ENST00000545896 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
FERMT3-208ENST00000545896 WIZO95785 1651 aa31.87■■■□□ 2.69
FERMT3-208ENST00000545896 OSCARQ8IYS5 282 aa31.83■■■□□ 2.69
FERMT3-208ENST00000545896 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
FERMT3-208ENST00000545896 RSF1Q96T23 1441 aaPredicted RBP31.67■■■□□ 2.66
FERMT3-208ENST00000545896 CFTRP13569 1480 aa31.65■■■□□ 2.66
FERMT3-208ENST00000545896 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
FERMT3-208ENST00000545896 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
FERMT3-208ENST00000545896 RIMBP3CA6NJZ7 1639 aa31.4■■■□□ 2.62
FERMT3-208ENST00000545896 RIMBP3BA6NNM3 1639 aa31.4■■■□□ 2.62
FERMT3-208ENST00000545896 RIMBP3Q9UFD9 1639 aa31.4■■■□□ 2.62
FERMT3-208ENST00000545896 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
FERMT3-208ENST00000545896 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
FERMT3-208ENST00000545896 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
FERMT3-208ENST00000545896 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
FERMT3-208ENST00000545896 ARHGEF11O15085 1522 aa31.25■■■□□ 2.59
FERMT3-208ENST00000545896 CYB5RLQ6IPT4 315 aa31.14■■■□□ 2.58
FERMT3-208ENST00000545896 TOPBP1Q92547 1522 aa31.13■■■□□ 2.57
FERMT3-208ENST00000545896 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
FERMT3-208ENST00000545896 EIF4G3O43432 1585 aaKnown RBP31.06■■■□□ 2.56
FERMT3-208ENST00000545896 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
FERMT3-208ENST00000545896 TRHP20396 242 aaPredicted RBP31.02■■■□□ 2.56
FERMT3-208ENST00000545896 FBLN2P98095 1184 aa30.96■■■□□ 2.55
FERMT3-208ENST00000545896 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
FERMT3-208ENST00000545896 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.542e-6■■■■■ 29.7
FERMT3-208ENST00000545896 CHD1O14646 1710 aa30.94■■■□□ 2.54
FERMT3-208ENST00000545896 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
FERMT3-208ENST00000545896 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
FERMT3-208ENST00000545896 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
FERMT3-208ENST00000545896 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
FERMT3-208ENST00000545896 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
FERMT3-208ENST00000545896 SOGA1O94964 1423 aa30.66■■■□□ 2.5
FERMT3-208ENST00000545896 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
FERMT3-208ENST00000545896 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
FERMT3-208ENST00000545896 AEBP2Q6ZN18 517 aaPredicted RBP30.58■■■□□ 2.49
FERMT3-208ENST00000545896 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
FERMT3-208ENST00000545896 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
FERMT3-208ENST00000545896 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
FERMT3-208ENST00000545896 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
FERMT3-208ENST00000545896 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
FERMT3-208ENST00000545896 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
FERMT3-208ENST00000545896 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
FERMT3-208ENST00000545896 CUX1P39880 1505 aa30.37■■■□□ 2.45
FERMT3-208ENST00000545896 GAPVD1Q14C86 1478 aa30.32■■■□□ 2.44
FERMT3-208ENST00000545896 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
FERMT3-208ENST00000545896 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
FERMT3-208ENST00000545896 ABCA5Q8WWZ7 1642 aa30.09■■■□□ 2.41
FERMT3-208ENST00000545896 ERCC6L2Q5T890 1561 aa30.05■■■□□ 2.4
FERMT3-208ENST00000545896 GRIN2AQ12879 1464 aa30.04■■■□□ 2.4
FERMT3-208ENST00000545896 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
FERMT3-208ENST00000545896 NUP160Q12769 1436 aa29.95■■■□□ 2.38
FERMT3-208ENST00000545896 ADAMTS12P58397 1594 aa29.93■■■□□ 2.38
FERMT3-208ENST00000545896 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
FERMT3-208ENST00000545896 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
FERMT3-208ENST00000545896 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
FERMT3-208ENST00000545896 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
FERMT3-208ENST00000545896 KIF13AQ9H1H9 1805 aa29.78■■■□□ 2.36
FERMT3-208ENST00000545896 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
FERMT3-208ENST00000545896 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
FERMT3-208ENST00000545896 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
FERMT3-208ENST00000545896 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms