RNA–Protein interactions for RNA: ENST00000545859.5

GABARAPL1-216, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-216ENST00000545859 NISCHQ9Y2I1 1504 aa49.73■■■■■ 5.55
GABARAPL1-216ENST00000545859 ABCC9O60706 1549 aa44.55■■■■■ 4.72
GABARAPL1-216ENST00000545859 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
GABARAPL1-216ENST00000545859 RB1CC1Q8TDY2 1594 aa42.38■■■■■ 4.37
GABARAPL1-216ENST00000545859 NACADO15069 1562 aa42.12■■■■■ 4.33
GABARAPL1-216ENST00000545859 DCAF8L2P0C7V8 631 aa42.05■■■■■ 4.32
GABARAPL1-216ENST00000545859 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
GABARAPL1-216ENST00000545859 MYO15BQ96JP2 1530 aa41.56■■■■■ 4.24
GABARAPL1-216ENST00000545859 PABPN1Q86U42 306 aaKnown RBP eCLIP41.56■■■■■ 4.24
GABARAPL1-216ENST00000545859 UNC13AQ9UPW8 1703 aa41.35■■■■■ 4.21
GABARAPL1-216ENST00000545859 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
GABARAPL1-216ENST00000545859 BICRAQ9NZM4 1560 aa41.16■■■■■ 4.18
GABARAPL1-216ENST00000545859 DCAF1Q9Y4B6 1507 aa41.05■■■■■ 4.16
GABARAPL1-216ENST00000545859 SCRIBQ14160 1630 aa40.61■■■■■ 4.09
GABARAPL1-216ENST00000545859 SHROOM4Q9ULL8 1493 aa40.58■■■■■ 4.09
GABARAPL1-216ENST00000545859 CC2D2AQ9P2K1 1620 aa40.2■■■■■ 4.03
GABARAPL1-216ENST00000545859 EIF4G1Q04637 1599 aaKnown RBP40.14■■■■■ 4.02
GABARAPL1-216ENST00000545859 CECR2Q9BXF3 1484 aa40.13■■■■■ 4.01
GABARAPL1-216ENST00000545859 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
GABARAPL1-216ENST00000545859 ATAD2BQ9ULI0 1458 aa38.81■■■■□ 3.8
GABARAPL1-216ENST00000545859 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
GABARAPL1-216ENST00000545859 SMARCA2P51531 1590 aa38.67■■■■□ 3.78
GABARAPL1-216ENST00000545859 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
GABARAPL1-216ENST00000545859 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.76
GABARAPL1-216ENST00000545859 ERCC6Q03468 1493 aa38.46■■■■□ 3.75
GABARAPL1-216ENST00000545859 BAZ1BQ9UIG0 1483 aaKnown RBP38.42■■■■□ 3.74
GABARAPL1-216ENST00000545859 PEG3Q9GZU2 1588 aa38.36■■■■□ 3.73
GABARAPL1-216ENST00000545859 MROH2BQ7Z745 1585 aa38.33■■■■□ 3.73
GABARAPL1-216ENST00000545859 DNAJC5Q9H3Z4 198 aa38.33■■■■□ 3.73
GABARAPL1-216ENST00000545859 CUX2O14529 1486 aa38.33■■■■□ 3.73
GABARAPL1-216ENST00000545859 NESP48681 1621 aa38.3■■■■□ 3.72
GABARAPL1-216ENST00000545859 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
GABARAPL1-216ENST00000545859 WIZO95785 1651 aa37.83■■■■□ 3.65
GABARAPL1-216ENST00000545859 PDS5BQ9NTI5 1447 aa37.82■■■■□ 3.64
GABARAPL1-216ENST00000545859 THOC2Q8NI27 1593 aaKnown RBP37.81■■■■□ 3.64
GABARAPL1-216ENST00000545859 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
GABARAPL1-216ENST00000545859 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
GABARAPL1-216ENST00000545859 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
GABARAPL1-216ENST00000545859 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
GABARAPL1-216ENST00000545859 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
GABARAPL1-216ENST00000545859 WDR62O43379 1518 aa37.35■■■■□ 3.57
GABARAPL1-216ENST00000545859 CFTRP13569 1480 aa37.33■■■■□ 3.57
GABARAPL1-216ENST00000545859 CEP164Q9UPV0 1460 aa37.33■■■■□ 3.57
GABARAPL1-216ENST00000545859 FANCD2Q9BXW9 1451 aa37.31■■■■□ 3.56
GABARAPL1-216ENST00000545859 URB2Q14146 1524 aaKnown RBP37■■■■□ 3.51
GABARAPL1-216ENST00000545859 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
GABARAPL1-216ENST00000545859 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
GABARAPL1-216ENST00000545859 OSCARQ8IYS5 282 aa36.68■■■■□ 3.46
GABARAPL1-216ENST00000545859 TRIM41Q8WV44 630 aa36.68■■■■□ 3.46
GABARAPL1-216ENST00000545859 TOPBP1Q92547 1522 aa36.6■■■■□ 3.45
GABARAPL1-216ENST00000545859 IFT140Q96RY7 1462 aa36.59■■■■□ 3.45
GABARAPL1-216ENST00000545859 ZNF608Q9ULD9 1512 aaPredicted RBP36.55■■■■□ 3.44
GABARAPL1-216ENST00000545859 ABCC8Q09428 1581 aa36.52■■■■□ 3.44
GABARAPL1-216ENST00000545859 DNMBPQ6XZF7 1577 aa36.44■■■■□ 3.42
GABARAPL1-216ENST00000545859 EIF4G3O43432 1585 aaKnown RBP36.28■■■■□ 3.4
GABARAPL1-216ENST00000545859 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.39
GABARAPL1-216ENST00000545859 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
GABARAPL1-216ENST00000545859 TARBP1Q13395 1621 aaKnown RBP36.24■■■■□ 3.39
GABARAPL1-216ENST00000545859 RAD54L2Q9Y4B4 1467 aa36.13■■■■□ 3.37
GABARAPL1-216ENST00000545859 SOGA1O94964 1423 aa36.11■■■■□ 3.37
GABARAPL1-216ENST00000545859 RIMBP3CA6NJZ7 1639 aa36.1■■■■□ 3.37
GABARAPL1-216ENST00000545859 RIMBP3BA6NNM3 1639 aa36.1■■■■□ 3.37
GABARAPL1-216ENST00000545859 RIMBP3Q9UFD9 1639 aa36.1■■■■□ 3.37
GABARAPL1-216ENST00000545859 TDRD9Q8NDG6 1382 aaKnown RBP36.05■■■■□ 3.36
GABARAPL1-216ENST00000545859 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
GABARAPL1-216ENST00000545859 FBLN2P98095 1184 aa36.02■■■■□ 3.36
GABARAPL1-216ENST00000545859 FGD5Q6ZNL6 1462 aa36.02■■■■□ 3.36
GABARAPL1-216ENST00000545859 ARHGEF11O15085 1522 aa36.02■■■■□ 3.36
GABARAPL1-216ENST00000545859 CUX1P39880 1505 aa36■■■■□ 3.35
GABARAPL1-216ENST00000545859 CHD1O14646 1710 aa35.97■■■■□ 3.35
GABARAPL1-216ENST00000545859 WDR97A6NE52 1622 aa35.84■■■■□ 3.33
GABARAPL1-216ENST00000545859 CYB5RLQ6IPT4 315 aa35.84■■■■□ 3.33
GABARAPL1-216ENST00000545859 SNAPC4Q5SXM2 1469 aa35.84■■■■□ 3.33
GABARAPL1-216ENST00000545859 CHMP7Q8WUX9 453 aaPredicted RBP35.77■■■■□ 3.32
GABARAPL1-216ENST00000545859 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
GABARAPL1-216ENST00000545859 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
GABARAPL1-216ENST00000545859 ARAP1Q96P48 1450 aa35.68■■■■□ 3.3
GABARAPL1-216ENST00000545859 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
GABARAPL1-216ENST00000545859 SYNJ2O15056 1496 aa35.63■■■■□ 3.29
GABARAPL1-216ENST00000545859 CLASP1Q7Z460 1538 aa35.61■■■■□ 3.29
GABARAPL1-216ENST00000545859 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
GABARAPL1-216ENST00000545859 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
GABARAPL1-216ENST00000545859 PBRM1Q86U86 1689 aa35.52■■■■□ 3.28
GABARAPL1-216ENST00000545859 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
GABARAPL1-216ENST00000545859 ABCA5Q8WWZ7 1642 aa35.51■■■■□ 3.28
GABARAPL1-216ENST00000545859 TRHP20396 242 aaPredicted RBP35.41■■■■□ 3.26
GABARAPL1-216ENST00000545859 TOP2BQ02880 1626 aa35.41■■■■□ 3.26
GABARAPL1-216ENST00000545859 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
GABARAPL1-216ENST00000545859 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
GABARAPL1-216ENST00000545859 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
GABARAPL1-216ENST00000545859 FHAD1B1AJZ9 1412 aa35.2■■■■□ 3.23
GABARAPL1-216ENST00000545859 NUP160Q12769 1436 aa35.18■■■■□ 3.22
GABARAPL1-216ENST00000545859 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
GABARAPL1-216ENST00000545859 CEP170Q5SW79 1584 aa35.14■■■■□ 3.22
GABARAPL1-216ENST00000545859 ERCC6L2Q5T890 1561 aa35.08■■■■□ 3.21
GABARAPL1-216ENST00000545859 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
GABARAPL1-216ENST00000545859 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
GABARAPL1-216ENST00000545859 PRG4Q92954 1404 aaPredicted RBP34.86■■■■□ 3.17
GABARAPL1-216ENST00000545859 IGF1RP08069 1367 aa34.79■■■■□ 3.16
GABARAPL1-216ENST00000545859 KIF27Q86VH2 1401 aa34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms