RNA–Protein interactions for RNA: ENST00000545717.1

DDX11-230, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-230ENST00000545717 NISCHQ9Y2I1 1504 aa33.92■■■■□ 3.02
DDX11-230ENST00000545717 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
DDX11-230ENST00000545717 ABCC9O60706 1549 aa28.5■■■□□ 2.15
DDX11-230ENST00000545717 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
DDX11-230ENST00000545717 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
DDX11-230ENST00000545717 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
DDX11-230ENST00000545717 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
DDX11-230ENST00000545717 NACADO15069 1562 aa27.95■■■□□ 2.07
DDX11-230ENST00000545717 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
DDX11-230ENST00000545717 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
DDX11-230ENST00000545717 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
DDX11-230ENST00000545717 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
DDX11-230ENST00000545717 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
DDX11-230ENST00000545717 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
DDX11-230ENST00000545717 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
DDX11-230ENST00000545717 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
DDX11-230ENST00000545717 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
DDX11-230ENST00000545717 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
DDX11-230ENST00000545717 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
DDX11-230ENST00000545717 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
DDX11-230ENST00000545717 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
DDX11-230ENST00000545717 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
DDX11-230ENST00000545717 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
DDX11-230ENST00000545717 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
DDX11-230ENST00000545717 WIZO95785 1651 aa25.91■■□□□ 1.74
DDX11-230ENST00000545717 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
DDX11-230ENST00000545717 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
DDX11-230ENST00000545717 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
DDX11-230ENST00000545717 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
DDX11-230ENST00000545717 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
DDX11-230ENST00000545717 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
DDX11-230ENST00000545717 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
DDX11-230ENST00000545717 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
DDX11-230ENST00000545717 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
DDX11-230ENST00000545717 CFTRP13569 1480 aa25.01■■□□□ 1.59
DDX11-230ENST00000545717 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
DDX11-230ENST00000545717 NESP48681 1621 aa24.83■■□□□ 1.57
DDX11-230ENST00000545717 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
DDX11-230ENST00000545717 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
DDX11-230ENST00000545717 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
DDX11-230ENST00000545717 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
DDX11-230ENST00000545717 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
DDX11-230ENST00000545717 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
DDX11-230ENST00000545717 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
DDX11-230ENST00000545717 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
DDX11-230ENST00000545717 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
DDX11-230ENST00000545717 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
DDX11-230ENST00000545717 TOP2BQ02880 1626 aa24.52■■□□□ 1.52
DDX11-230ENST00000545717 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
DDX11-230ENST00000545717 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
DDX11-230ENST00000545717 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
DDX11-230ENST00000545717 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
DDX11-230ENST00000545717 CUX1P39880 1505 aa24.48■■□□□ 1.51
DDX11-230ENST00000545717 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
DDX11-230ENST00000545717 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
DDX11-230ENST00000545717 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
DDX11-230ENST00000545717 WDR62O43379 1518 aa24.37■■□□□ 1.49
DDX11-230ENST00000545717 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
DDX11-230ENST00000545717 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
DDX11-230ENST00000545717 SOGA1O94964 1423 aa24.18■■□□□ 1.46
DDX11-230ENST00000545717 EEA1Q15075 1411 aa24.15■■□□□ 1.46
DDX11-230ENST00000545717 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
DDX11-230ENST00000545717 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
DDX11-230ENST00000545717 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
DDX11-230ENST00000545717 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
DDX11-230ENST00000545717 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
DDX11-230ENST00000545717 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
DDX11-230ENST00000545717 CUX2O14529 1486 aa24.08■■□□□ 1.45
DDX11-230ENST00000545717 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
DDX11-230ENST00000545717 ABCA5Q8WWZ7 1642 aa23.97■■□□□ 1.43
DDX11-230ENST00000545717 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.43
DDX11-230ENST00000545717 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
DDX11-230ENST00000545717 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
DDX11-230ENST00000545717 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
DDX11-230ENST00000545717 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
DDX11-230ENST00000545717 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
DDX11-230ENST00000545717 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
DDX11-230ENST00000545717 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
DDX11-230ENST00000545717 CUL7Q14999 1698 aa23.86■■□□□ 1.41
DDX11-230ENST00000545717 AQRO60306 1485 aaKnown RBP eCLIP23.84■■□□□ 1.412e-8■■■■■ 36.8
DDX11-230ENST00000545717 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
DDX11-230ENST00000545717 KIF21BO75037 1637 aa23.81■■□□□ 1.4
DDX11-230ENST00000545717 IGF1RP08069 1367 aa23.8■■□□□ 1.4
DDX11-230ENST00000545717 CARMIL1Q5VZK9 1371 aa23.74■■□□□ 1.39
DDX11-230ENST00000545717 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
DDX11-230ENST00000545717 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
DDX11-230ENST00000545717 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
DDX11-230ENST00000545717 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
DDX11-230ENST00000545717 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
DDX11-230ENST00000545717 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
DDX11-230ENST00000545717 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
DDX11-230ENST00000545717 EHMT2Q96KQ7 1210 aa23.61■■□□□ 1.37
DDX11-230ENST00000545717 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
DDX11-230ENST00000545717 SYNJ2O15056 1496 aa23.6■■□□□ 1.37
DDX11-230ENST00000545717 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
DDX11-230ENST00000545717 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
DDX11-230ENST00000545717 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
DDX11-230ENST00000545717 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
DDX11-230ENST00000545717 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
DDX11-230ENST00000545717 FBLN2P98095 1184 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms