RNA–Protein interactions for RNA: ENST00000545698.1

TDG-210, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-210ENST00000545698 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
TDG-210ENST00000545698 ABCC9O60706 1549 aa43.16■■■■■ 4.5
TDG-210ENST00000545698 CCDC180Q9P1Z9 1646 aa42.99■■■■■ 4.47
TDG-210ENST00000545698 RB1CC1Q8TDY2 1594 aa41.01■■■■■ 4.16
TDG-210ENST00000545698 NACADO15069 1562 aa40.66■■■■■ 4.1
TDG-210ENST00000545698 DNAJC5BQ9UF47 199 aa40.56■■■■■ 4.08
TDG-210ENST00000545698 DCAF8L2P0C7V8 631 aa40.49■■■■■ 4.07
TDG-210ENST00000545698 PABPN1Q86U42 306 aaKnown RBP eCLIP40.15■■■■■ 4.02
TDG-210ENST00000545698 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
TDG-210ENST00000545698 MYO15BQ96JP2 1530 aa40■■■■□ 3.99
TDG-210ENST00000545698 BICRAQ9NZM4 1560 aa39.77■■■■□ 3.96
TDG-210ENST00000545698 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
TDG-210ENST00000545698 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
TDG-210ENST00000545698 SHROOM4Q9ULL8 1493 aa39.23■■■■□ 3.87
TDG-210ENST00000545698 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
TDG-210ENST00000545698 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
TDG-210ENST00000545698 CECR2Q9BXF3 1484 aa38.89■■■■□ 3.82
TDG-210ENST00000545698 EIF4G1Q04637 1599 aaKnown RBP38.84■■■■□ 3.81
TDG-210ENST00000545698 NCAPD3P42695 1498 aa37.51■■■■□ 3.59
TDG-210ENST00000545698 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
TDG-210ENST00000545698 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
TDG-210ENST00000545698 SMARCA4P51532 1647 aa37.33■■■■□ 3.57
TDG-210ENST00000545698 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
TDG-210ENST00000545698 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
TDG-210ENST00000545698 CUX2O14529 1486 aa37.26■■■■□ 3.55
TDG-210ENST00000545698 HMGXB3Q12766 1538 aa37.25■■■■□ 3.55
TDG-210ENST00000545698 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
TDG-210ENST00000545698 BAZ1BQ9UIG0 1483 aaKnown RBP37.06■■■■□ 3.52
TDG-210ENST00000545698 NESP48681 1621 aa37.01■■■■□ 3.52
TDG-210ENST00000545698 PEG3Q9GZU2 1588 aa36.93■■■■□ 3.5
TDG-210ENST00000545698 MROH2BQ7Z745 1585 aa36.82■■■■□ 3.48
TDG-210ENST00000545698 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
TDG-210ENST00000545698 THOC2Q8NI27 1593 aaKnown RBP36.67■■■■□ 3.46
TDG-210ENST00000545698 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
TDG-210ENST00000545698 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
TDG-210ENST00000545698 WIZO95785 1651 aa36.4■■■■□ 3.42
TDG-210ENST00000545698 CADPSQ9ULU8 1353 aa36.38■■■■□ 3.41
TDG-210ENST00000545698 MRC2Q9UBG0 1479 aa36.23■■■■□ 3.39
TDG-210ENST00000545698 WDR62O43379 1518 aa36.13■■■■□ 3.37
TDG-210ENST00000545698 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
TDG-210ENST00000545698 FANCD2Q9BXW9 1451 aa35.99■■■■□ 3.35
TDG-210ENST00000545698 RSF1Q96T23 1441 aaPredicted RBP35.98■■■■□ 3.35
TDG-210ENST00000545698 CFTRP13569 1480 aa35.92■■■■□ 3.34
TDG-210ENST00000545698 TOP2AP11388 1531 aaKnown RBP35.91■■■■□ 3.34
TDG-210ENST00000545698 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
TDG-210ENST00000545698 URB2Q14146 1524 aaKnown RBP35.68■■■■□ 3.3
TDG-210ENST00000545698 PRDM2Q13029 1718 aa35.63■■■■□ 3.29
TDG-210ENST00000545698 OSCARQ8IYS5 282 aa35.54■■■■□ 3.28
TDG-210ENST00000545698 CCDC88BA6NC98 1476 aa35.49■■■■□ 3.27
TDG-210ENST00000545698 IFT140Q96RY7 1462 aa35.33■■■■□ 3.25
TDG-210ENST00000545698 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
TDG-210ENST00000545698 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
TDG-210ENST00000545698 ABCC8Q09428 1581 aa35.21■■■■□ 3.23
TDG-210ENST00000545698 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
TDG-210ENST00000545698 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
TDG-210ENST00000545698 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
TDG-210ENST00000545698 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
TDG-210ENST00000545698 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
TDG-210ENST00000545698 TARBP1Q13395 1621 aaKnown RBP34.98■■■■□ 3.19
TDG-210ENST00000545698 ARHGEF11O15085 1522 aa34.96■■■■□ 3.19
TDG-210ENST00000545698 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.194e-6■■■■■ 31
TDG-210ENST00000545698 CHD1O14646 1710 aa34.92■■■■□ 3.18
TDG-210ENST00000545698 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
TDG-210ENST00000545698 FBLN2P98095 1184 aa34.81■■■■□ 3.16
TDG-210ENST00000545698 RAD54L2Q9Y4B4 1467 aa34.78■■■■□ 3.16
TDG-210ENST00000545698 SOGA1O94964 1423 aa34.75■■■■□ 3.15
TDG-210ENST00000545698 CYB5RLQ6IPT4 315 aa34.73■■■■□ 3.15
TDG-210ENST00000545698 TDRD9Q8NDG6 1382 aaKnown RBP34.71■■■■□ 3.15
TDG-210ENST00000545698 FGD5Q6ZNL6 1462 aa34.68■■■■□ 3.14
TDG-210ENST00000545698 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
TDG-210ENST00000545698 CUX1P39880 1505 aa34.6■■■■□ 3.13
TDG-210ENST00000545698 SNAPC4Q5SXM2 1469 aa34.6■■■■□ 3.13
TDG-210ENST00000545698 ARAP1Q96P48 1450 aa34.59■■■■□ 3.13
TDG-210ENST00000545698 CHMP7Q8WUX9 453 aaPredicted RBP34.5■■■■□ 3.11
TDG-210ENST00000545698 MAGI1Q96QZ7 1491 aaPredicted RBP34.5■■■■□ 3.11
TDG-210ENST00000545698 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
TDG-210ENST00000545698 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
TDG-210ENST00000545698 CLASP1Q7Z460 1538 aa34.45■■■■□ 3.1
TDG-210ENST00000545698 TRHP20396 242 aaPredicted RBP34.44■■■■□ 3.1
TDG-210ENST00000545698 SYNJ2O15056 1496 aa34.38■■■■□ 3.09
TDG-210ENST00000545698 PBRM1Q86U86 1689 aa34.38■■■■□ 3.09
TDG-210ENST00000545698 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
TDG-210ENST00000545698 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
TDG-210ENST00000545698 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
TDG-210ENST00000545698 ABCA5Q8WWZ7 1642 aa34.23■■■■□ 3.07
TDG-210ENST00000545698 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
TDG-210ENST00000545698 GRIN2AQ12879 1464 aa34.03■■■■□ 3.04
TDG-210ENST00000545698 BIVM-ERCC5R4GMW8 1640 aa34.03■■■■□ 3.04
TDG-210ENST00000545698 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
TDG-210ENST00000545698 ADAMTS12P58397 1594 aa34■■■■□ 3.03
TDG-210ENST00000545698 CEP170Q5SW79 1584 aa33.92■■■■□ 3.02
TDG-210ENST00000545698 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
TDG-210ENST00000545698 NUP160Q12769 1436 aa33.89■■■■□ 3.02
TDG-210ENST00000545698 FHAD1B1AJZ9 1412 aa33.88■■■■□ 3.01
TDG-210ENST00000545698 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
TDG-210ENST00000545698 SHROOM2Q13796 1616 aa33.79■■■■□ 3
TDG-210ENST00000545698 PRG4Q92954 1404 aaPredicted RBP33.62■■■□□ 2.97
TDG-210ENST00000545698 AEBP2Q6ZN18 517 aaPredicted RBP33.58■■■□□ 2.97
TDG-210ENST00000545698 JPH4Q96JJ6 628 aa33.57■■■□□ 2.96
TDG-210ENST00000545698 RUSC2Q8N2Y8 1516 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms