RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
SCNN1A-223ENST00000545605 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
SCNN1A-223ENST00000545605 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
SCNN1A-223ENST00000545605 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
SCNN1A-223ENST00000545605 ABCC9O60706 1549 aa22.5■■□□□ 1.19
SCNN1A-223ENST00000545605 MYO15BQ96JP2 1530 aa22.4■■□□□ 1.18
SCNN1A-223ENST00000545605 NACADO15069 1562 aa22.26■■□□□ 1.15
SCNN1A-223ENST00000545605 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
SCNN1A-223ENST00000545605 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
SCNN1A-223ENST00000545605 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
SCNN1A-223ENST00000545605 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
SCNN1A-223ENST00000545605 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
SCNN1A-223ENST00000545605 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
SCNN1A-223ENST00000545605 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
SCNN1A-223ENST00000545605 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
SCNN1A-223ENST00000545605 CECR2Q9BXF3 1484 aa20.95■□□□□ 0.94
SCNN1A-223ENST00000545605 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
SCNN1A-223ENST00000545605 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
SCNN1A-223ENST00000545605 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
SCNN1A-223ENST00000545605 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SCNN1A-223ENST00000545605 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
SCNN1A-223ENST00000545605 WIZO95785 1651 aa20.77■□□□□ 0.91
SCNN1A-223ENST00000545605 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
SCNN1A-223ENST00000545605 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
SCNN1A-223ENST00000545605 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
SCNN1A-223ENST00000545605 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
SCNN1A-223ENST00000545605 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
SCNN1A-223ENST00000545605 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
SCNN1A-223ENST00000545605 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
SCNN1A-223ENST00000545605 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
SCNN1A-223ENST00000545605 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
SCNN1A-223ENST00000545605 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
SCNN1A-223ENST00000545605 CFTRP13569 1480 aa19.92■□□□□ 0.78
SCNN1A-223ENST00000545605 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
SCNN1A-223ENST00000545605 CADPSQ9ULU8 1353 aa19.8■□□□□ 0.76
SCNN1A-223ENST00000545605 DNAJC5BQ9UF47 199 aa19.78■□□□□ 0.76
SCNN1A-223ENST00000545605 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
SCNN1A-223ENST00000545605 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
SCNN1A-223ENST00000545605 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SCNN1A-223ENST00000545605 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
SCNN1A-223ENST00000545605 NESP48681 1621 aa19.69■□□□□ 0.74
SCNN1A-223ENST00000545605 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
SCNN1A-223ENST00000545605 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
SCNN1A-223ENST00000545605 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
SCNN1A-223ENST00000545605 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
SCNN1A-223ENST00000545605 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
SCNN1A-223ENST00000545605 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
SCNN1A-223ENST00000545605 CUX1P39880 1505 aa19.58■□□□□ 0.73
SCNN1A-223ENST00000545605 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
SCNN1A-223ENST00000545605 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
SCNN1A-223ENST00000545605 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
SCNN1A-223ENST00000545605 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
SCNN1A-223ENST00000545605 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
SCNN1A-223ENST00000545605 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
SCNN1A-223ENST00000545605 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SCNN1A-223ENST00000545605 WDR62O43379 1518 aa19.42■□□□□ 0.7
SCNN1A-223ENST00000545605 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
SCNN1A-223ENST00000545605 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
SCNN1A-223ENST00000545605 EEA1Q15075 1411 aa19.35■□□□□ 0.69
SCNN1A-223ENST00000545605 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
SCNN1A-223ENST00000545605 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
SCNN1A-223ENST00000545605 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
SCNN1A-223ENST00000545605 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
SCNN1A-223ENST00000545605 SOGA1O94964 1423 aa19.24■□□□□ 0.67
SCNN1A-223ENST00000545605 KIF21BO75037 1637 aa19.22■□□□□ 0.67
SCNN1A-223ENST00000545605 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
SCNN1A-223ENST00000545605 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
SCNN1A-223ENST00000545605 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
SCNN1A-223ENST00000545605 CUX2O14529 1486 aa19.16■□□□□ 0.66
SCNN1A-223ENST00000545605 CUL7Q14999 1698 aa19.14■□□□□ 0.66
SCNN1A-223ENST00000545605 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
SCNN1A-223ENST00000545605 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
SCNN1A-223ENST00000545605 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
SCNN1A-223ENST00000545605 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
SCNN1A-223ENST00000545605 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
SCNN1A-223ENST00000545605 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
SCNN1A-223ENST00000545605 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
SCNN1A-223ENST00000545605 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
SCNN1A-223ENST00000545605 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
SCNN1A-223ENST00000545605 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
SCNN1A-223ENST00000545605 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
SCNN1A-223ENST00000545605 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
SCNN1A-223ENST00000545605 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
SCNN1A-223ENST00000545605 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
SCNN1A-223ENST00000545605 IGF1RP08069 1367 aa18.9■□□□□ 0.62
SCNN1A-223ENST00000545605 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-223ENST00000545605 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
SCNN1A-223ENST00000545605 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.614e-8■■■■■ 31.9
SCNN1A-223ENST00000545605 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
SCNN1A-223ENST00000545605 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
SCNN1A-223ENST00000545605 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
SCNN1A-223ENST00000545605 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
SCNN1A-223ENST00000545605 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
SCNN1A-223ENST00000545605 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
SCNN1A-223ENST00000545605 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
SCNN1A-223ENST00000545605 CHD1O14646 1710 aa18.74■□□□□ 0.59
SCNN1A-223ENST00000545605 GRIN2AQ12879 1464 aa18.72■□□□□ 0.59
SCNN1A-223ENST00000545605 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
SCNN1A-223ENST00000545605 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
SCNN1A-223ENST00000545605 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
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