RNA–Protein interactions for RNA: ENST00000545388.2

IST1-222, Transcript of IST1, ESCRT-III associated factor, humanhuman

TSL 2

Gene IST1, Length 630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IST1-222ENST00000545388 NISCHQ9Y2I1 1504 aa27.54■■■□□ 2
IST1-222ENST00000545388 ABCC9O60706 1549 aa24.75■■□□□ 1.55
IST1-222ENST00000545388 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.53
IST1-222ENST00000545388 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
IST1-222ENST00000545388 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
IST1-222ENST00000545388 NACADO15069 1562 aa23.31■■□□□ 1.32
IST1-222ENST00000545388 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
IST1-222ENST00000545388 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
IST1-222ENST00000545388 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
IST1-222ENST00000545388 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
IST1-222ENST00000545388 ZCCHC6Q5VYS8 1495 aaKnown RBP22.81■■□□□ 1.24
IST1-222ENST00000545388 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
IST1-222ENST00000545388 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
IST1-222ENST00000545388 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
IST1-222ENST00000545388 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
IST1-222ENST00000545388 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
IST1-222ENST00000545388 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
IST1-222ENST00000545388 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
IST1-222ENST00000545388 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
IST1-222ENST00000545388 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
IST1-222ENST00000545388 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
IST1-222ENST00000545388 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
IST1-222ENST00000545388 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
IST1-222ENST00000545388 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
IST1-222ENST00000545388 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
IST1-222ENST00000545388 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
IST1-222ENST00000545388 NESP48681 1621 aa21.26■□□□□ 0.99
IST1-222ENST00000545388 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
IST1-222ENST00000545388 CUX2O14529 1486 aa21.2■□□□□ 0.98
IST1-222ENST00000545388 DNAJC5Q9H3Z4 198 aa21.2■□□□□ 0.98
IST1-222ENST00000545388 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
IST1-222ENST00000545388 WIZO95785 1651 aa21.03■□□□□ 0.96
IST1-222ENST00000545388 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
IST1-222ENST00000545388 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
IST1-222ENST00000545388 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
IST1-222ENST00000545388 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.94
IST1-222ENST00000545388 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
IST1-222ENST00000545388 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
IST1-222ENST00000545388 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
IST1-222ENST00000545388 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
IST1-222ENST00000545388 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
IST1-222ENST00000545388 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
IST1-222ENST00000545388 WDR62O43379 1518 aa20.67■□□□□ 0.9
IST1-222ENST00000545388 CFTRP13569 1480 aa20.65■□□□□ 0.9
IST1-222ENST00000545388 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
IST1-222ENST00000545388 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
IST1-222ENST00000545388 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
IST1-222ENST00000545388 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
IST1-222ENST00000545388 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
IST1-222ENST00000545388 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
IST1-222ENST00000545388 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
IST1-222ENST00000545388 IFT140Q96RY7 1462 aa20.26■□□□□ 0.83
IST1-222ENST00000545388 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
IST1-222ENST00000545388 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
IST1-222ENST00000545388 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
IST1-222ENST00000545388 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
IST1-222ENST00000545388 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.817e-8■■■■■ 33.6
IST1-222ENST00000545388 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
IST1-222ENST00000545388 FBLN2P98095 1184 aa20.08■□□□□ 0.81
IST1-222ENST00000545388 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
IST1-222ENST00000545388 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
IST1-222ENST00000545388 SOGA1O94964 1423 aa20.03■□□□□ 0.8
IST1-222ENST00000545388 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
IST1-222ENST00000545388 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
IST1-222ENST00000545388 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
IST1-222ENST00000545388 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
IST1-222ENST00000545388 CHD1O14646 1710 aa20■□□□□ 0.79
IST1-222ENST00000545388 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
IST1-222ENST00000545388 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
IST1-222ENST00000545388 CUX1P39880 1505 aa19.96■□□□□ 0.79
IST1-222ENST00000545388 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
IST1-222ENST00000545388 SNAPC4Q5SXM2 1469 aa19.89■□□□□ 0.77
IST1-222ENST00000545388 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
IST1-222ENST00000545388 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
IST1-222ENST00000545388 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
IST1-222ENST00000545388 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
IST1-222ENST00000545388 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
IST1-222ENST00000545388 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
IST1-222ENST00000545388 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
IST1-222ENST00000545388 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
IST1-222ENST00000545388 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
IST1-222ENST00000545388 TRHP20396 242 aaPredicted RBP19.73■□□□□ 0.75
IST1-222ENST00000545388 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
IST1-222ENST00000545388 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
IST1-222ENST00000545388 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
IST1-222ENST00000545388 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
IST1-222ENST00000545388 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
IST1-222ENST00000545388 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
IST1-222ENST00000545388 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
IST1-222ENST00000545388 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
IST1-222ENST00000545388 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
IST1-222ENST00000545388 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
IST1-222ENST00000545388 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
IST1-222ENST00000545388 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
IST1-222ENST00000545388 NUP160Q12769 1436 aa19.46■□□□□ 0.71
IST1-222ENST00000545388 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
IST1-222ENST00000545388 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
IST1-222ENST00000545388 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
IST1-222ENST00000545388 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
IST1-222ENST00000545388 IGF1RP08069 1367 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms