RNA–Protein interactions for RNA: ENST00000545331.5

TULP3-208, Transcript of tubby like protein 3, humanhuman

TSL 2

Gene TULP3, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-208ENST00000545331 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
TULP3-208ENST00000545331 CCDC180Q9P1Z9 1646 aa39.49■■■■□ 3.91
TULP3-208ENST00000545331 ABCC9O60706 1549 aa38.35■■■■□ 3.73
TULP3-208ENST00000545331 NACADO15069 1562 aa37.09■■■■□ 3.53
TULP3-208ENST00000545331 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.53
TULP3-208ENST00000545331 ZCCHC6Q5VYS8 1495 aaKnown RBP37.06■■■■□ 3.52
TULP3-208ENST00000545331 MYO15BQ96JP2 1530 aa36.98■■■■□ 3.51
TULP3-208ENST00000545331 DCAF8L2P0C7V8 631 aa36.9■■■■□ 3.5
TULP3-208ENST00000545331 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
TULP3-208ENST00000545331 UNC13AQ9UPW8 1703 aa36.17■■■■□ 3.38
TULP3-208ENST00000545331 SCRIBQ14160 1630 aa35.92■■■■□ 3.34
TULP3-208ENST00000545331 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
TULP3-208ENST00000545331 PABPN1Q86U42 306 aaKnown RBP eCLIP35.81■■■■□ 3.32
TULP3-208ENST00000545331 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
TULP3-208ENST00000545331 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
TULP3-208ENST00000545331 EIF4G1Q04637 1599 aaKnown RBP34.95■■■■□ 3.19
TULP3-208ENST00000545331 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
TULP3-208ENST00000545331 CECR2Q9BXF3 1484 aa34.51■■■■□ 3.11
TULP3-208ENST00000545331 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.11
TULP3-208ENST00000545331 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
TULP3-208ENST00000545331 SMARCA2P51531 1590 aa34.23■■■■□ 3.07
TULP3-208ENST00000545331 ATAD2BQ9ULI0 1458 aa34.2■■■■□ 3.07
TULP3-208ENST00000545331 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
TULP3-208ENST00000545331 MROH2BQ7Z745 1585 aa34.18■■■■□ 3.06
TULP3-208ENST00000545331 PEG3Q9GZU2 1588 aa34.16■■■■□ 3.06
TULP3-208ENST00000545331 HMGXB3Q12766 1538 aa34.07■■■■□ 3.05
TULP3-208ENST00000545331 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
TULP3-208ENST00000545331 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
TULP3-208ENST00000545331 WIZO95785 1651 aa33.82■■■■□ 3
TULP3-208ENST00000545331 TOP2AP11388 1531 aaKnown RBP33.54■■■□□ 2.96
TULP3-208ENST00000545331 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
TULP3-208ENST00000545331 NESP48681 1621 aa33.22■■■□□ 2.91
TULP3-208ENST00000545331 CADPSQ9ULU8 1353 aa33.19■■■□□ 2.9
TULP3-208ENST00000545331 ERCC6Q03468 1493 aa33.1■■■□□ 2.89
TULP3-208ENST00000545331 CCDC88BA6NC98 1476 aa33.09■■■□□ 2.89
TULP3-208ENST00000545331 PDS5BQ9NTI5 1447 aa33.05■■■□□ 2.88
TULP3-208ENST00000545331 CFTRP13569 1480 aa33.04■■■□□ 2.88
TULP3-208ENST00000545331 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
TULP3-208ENST00000545331 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
TULP3-208ENST00000545331 PRDM2Q13029 1718 aa32.83■■■□□ 2.85
TULP3-208ENST00000545331 FANCD2Q9BXW9 1451 aa32.79■■■□□ 2.84
TULP3-208ENST00000545331 CUX2O14529 1486 aa32.77■■■□□ 2.84
TULP3-208ENST00000545331 THOC2Q8NI27 1593 aaKnown RBP32.77■■■□□ 2.84
TULP3-208ENST00000545331 CEP164Q9UPV0 1460 aa32.76■■■□□ 2.83
TULP3-208ENST00000545331 MRC2Q9UBG0 1479 aa32.68■■■□□ 2.82
TULP3-208ENST00000545331 WDR62O43379 1518 aa32.58■■■□□ 2.81
TULP3-208ENST00000545331 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
TULP3-208ENST00000545331 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
TULP3-208ENST00000545331 DNMBPQ6XZF7 1577 aa32.29■■■□□ 2.76
TULP3-208ENST00000545331 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
TULP3-208ENST00000545331 IFT140Q96RY7 1462 aa32.08■■■□□ 2.73
TULP3-208ENST00000545331 CUX1P39880 1505 aa32.07■■■□□ 2.72
TULP3-208ENST00000545331 POLA1P09884 1462 aaPredicted RBP32.02■■■□□ 2.72
TULP3-208ENST00000545331 WRNQ14191 1432 aaPredicted RBP eCLIP31.96■■■□□ 2.71
TULP3-208ENST00000545331 FGD5Q6ZNL6 1462 aa31.95■■■□□ 2.71
TULP3-208ENST00000545331 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
TULP3-208ENST00000545331 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
TULP3-208ENST00000545331 BIVM-ERCC5R4GMW8 1640 aa31.89■■■□□ 2.7
TULP3-208ENST00000545331 SOGA1O94964 1423 aa31.88■■■□□ 2.69
TULP3-208ENST00000545331 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
TULP3-208ENST00000545331 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.68
TULP3-208ENST00000545331 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
TULP3-208ENST00000545331 WDR97A6NE52 1622 aa31.8■■■□□ 2.68
TULP3-208ENST00000545331 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
TULP3-208ENST00000545331 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
TULP3-208ENST00000545331 AQRO60306 1485 aaKnown RBP eCLIP31.67■■■□□ 2.663e-7■■■■■ 30.5
TULP3-208ENST00000545331 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
TULP3-208ENST00000545331 ABCA5Q8WWZ7 1642 aa31.55■■■□□ 2.64
TULP3-208ENST00000545331 GRIN2BQ13224 1484 aa31.53■■■□□ 2.64
TULP3-208ENST00000545331 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
TULP3-208ENST00000545331 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TULP3-208ENST00000545331 MAGI1Q96QZ7 1491 aaPredicted RBP31.46■■■□□ 2.63
TULP3-208ENST00000545331 PBRM1Q86U86 1689 aa31.45■■■□□ 2.63
TULP3-208ENST00000545331 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
TULP3-208ENST00000545331 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
TULP3-208ENST00000545331 ERICH3Q5RHP9 1530 aa31.34■■■□□ 2.61
TULP3-208ENST00000545331 CHD1O14646 1710 aa31.31■■■□□ 2.6
TULP3-208ENST00000545331 SYNJ2O15056 1496 aa31.31■■■□□ 2.6
TULP3-208ENST00000545331 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
TULP3-208ENST00000545331 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
TULP3-208ENST00000545331 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
TULP3-208ENST00000545331 FBLN2P98095 1184 aa31.23■■■□□ 2.59
TULP3-208ENST00000545331 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
TULP3-208ENST00000545331 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.58
TULP3-208ENST00000545331 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
TULP3-208ENST00000545331 IGF1RP08069 1367 aa31.1■■■□□ 2.57
TULP3-208ENST00000545331 CUL7Q14999 1698 aa31.08■■■□□ 2.57
TULP3-208ENST00000545331 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
TULP3-208ENST00000545331 NUP160Q12769 1436 aa30.99■■■□□ 2.55
TULP3-208ENST00000545331 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
TULP3-208ENST00000545331 CARMIL1Q5VZK9 1371 aa30.94■■■□□ 2.54
TULP3-208ENST00000545331 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
TULP3-208ENST00000545331 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
TULP3-208ENST00000545331 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
TULP3-208ENST00000545331 EEA1Q15075 1411 aa30.85■■■□□ 2.53
TULP3-208ENST00000545331 RIMBP3CA6NJZ7 1639 aa30.83■■■□□ 2.53
TULP3-208ENST00000545331 RIMBP3BA6NNM3 1639 aa30.83■■■□□ 2.53
TULP3-208ENST00000545331 RIMBP3Q9UFD9 1639 aa30.83■■■□□ 2.53
TULP3-208ENST00000545331 RAPGEF2Q9Y4G8 1499 aa30.8■■■□□ 2.52
TULP3-208ENST00000545331 SHROOM2Q13796 1616 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms