RNA–Protein interactions for RNA: ENST00000545315.1

AP3B2-211, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 3

Gene AP3B2, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-211ENST00000545315 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
AP3B2-211ENST00000545315 ABCC9O60706 1549 aa22.56■■□□□ 1.2
AP3B2-211ENST00000545315 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
AP3B2-211ENST00000545315 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
AP3B2-211ENST00000545315 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
AP3B2-211ENST00000545315 NACADO15069 1562 aa20.93■□□□□ 0.94
AP3B2-211ENST00000545315 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
AP3B2-211ENST00000545315 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
AP3B2-211ENST00000545315 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
AP3B2-211ENST00000545315 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
AP3B2-211ENST00000545315 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
AP3B2-211ENST00000545315 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
AP3B2-211ENST00000545315 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
AP3B2-211ENST00000545315 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
AP3B2-211ENST00000545315 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
AP3B2-211ENST00000545315 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
AP3B2-211ENST00000545315 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
AP3B2-211ENST00000545315 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
AP3B2-211ENST00000545315 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
AP3B2-211ENST00000545315 CUX2O14529 1486 aa19.61■□□□□ 0.73
AP3B2-211ENST00000545315 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
AP3B2-211ENST00000545315 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
AP3B2-211ENST00000545315 NESP48681 1621 aa19.24■□□□□ 0.67
AP3B2-211ENST00000545315 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
AP3B2-211ENST00000545315 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
AP3B2-211ENST00000545315 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
AP3B2-211ENST00000545315 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
AP3B2-211ENST00000545315 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
AP3B2-211ENST00000545315 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
AP3B2-211ENST00000545315 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
AP3B2-211ENST00000545315 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
AP3B2-211ENST00000545315 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
AP3B2-211ENST00000545315 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
AP3B2-211ENST00000545315 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
AP3B2-211ENST00000545315 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
AP3B2-211ENST00000545315 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
AP3B2-211ENST00000545315 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
AP3B2-211ENST00000545315 WDR62O43379 1518 aa18.73■□□□□ 0.59
AP3B2-211ENST00000545315 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
AP3B2-211ENST00000545315 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
AP3B2-211ENST00000545315 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.57
AP3B2-211ENST00000545315 WIZO95785 1651 aa18.54■□□□□ 0.56
AP3B2-211ENST00000545315 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
AP3B2-211ENST00000545315 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
AP3B2-211ENST00000545315 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
AP3B2-211ENST00000545315 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
AP3B2-211ENST00000545315 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
AP3B2-211ENST00000545315 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
AP3B2-211ENST00000545315 CFTRP13569 1480 aa18.39■□□□□ 0.54
AP3B2-211ENST00000545315 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
AP3B2-211ENST00000545315 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
AP3B2-211ENST00000545315 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
AP3B2-211ENST00000545315 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
AP3B2-211ENST00000545315 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
AP3B2-211ENST00000545315 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
AP3B2-211ENST00000545315 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
AP3B2-211ENST00000545315 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
AP3B2-211ENST00000545315 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
AP3B2-211ENST00000545315 CHD1O14646 1710 aa18.15■□□□□ 0.5
AP3B2-211ENST00000545315 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
AP3B2-211ENST00000545315 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
AP3B2-211ENST00000545315 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
AP3B2-211ENST00000545315 FBLN2P98095 1184 aa18.06■□□□□ 0.48
AP3B2-211ENST00000545315 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
AP3B2-211ENST00000545315 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
AP3B2-211ENST00000545315 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
AP3B2-211ENST00000545315 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
AP3B2-211ENST00000545315 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
AP3B2-211ENST00000545315 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
AP3B2-211ENST00000545315 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
AP3B2-211ENST00000545315 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
AP3B2-211ENST00000545315 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
AP3B2-211ENST00000545315 SYNJ1O43426 1573 aa17.83■□□□□ 0.45
AP3B2-211ENST00000545315 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
AP3B2-211ENST00000545315 SOGA1O94964 1423 aa17.81■□□□□ 0.44
AP3B2-211ENST00000545315 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
AP3B2-211ENST00000545315 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
AP3B2-211ENST00000545315 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
AP3B2-211ENST00000545315 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
AP3B2-211ENST00000545315 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
AP3B2-211ENST00000545315 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
AP3B2-211ENST00000545315 CUX1P39880 1505 aa17.69■□□□□ 0.42
AP3B2-211ENST00000545315 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
AP3B2-211ENST00000545315 PBRM1Q86U86 1689 aa17.64■□□□□ 0.42
AP3B2-211ENST00000545315 ERCC6L2Q5T890 1561 aa17.59■□□□□ 0.41
AP3B2-211ENST00000545315 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
AP3B2-211ENST00000545315 KIF13AQ9H1H9 1805 aa17.53■□□□□ 0.4
AP3B2-211ENST00000545315 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
AP3B2-211ENST00000545315 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
AP3B2-211ENST00000545315 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
AP3B2-211ENST00000545315 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
AP3B2-211ENST00000545315 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
AP3B2-211ENST00000545315 NUP160Q12769 1436 aa17.42■□□□□ 0.38
AP3B2-211ENST00000545315 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
AP3B2-211ENST00000545315 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
AP3B2-211ENST00000545315 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
AP3B2-211ENST00000545315 ILDR1Q86SU0 546 aaPredicted RBP17.36■□□□□ 0.37
AP3B2-211ENST00000545315 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
AP3B2-211ENST00000545315 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
AP3B2-211ENST00000545315 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms