RNA–Protein interactions for RNA: ENST00000545280.5

C1RL-211, Transcript of complement C1r subcomponent like, humanhuman

TSL 3 BASIC

Gene C1RL, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-211ENST00000545280 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
C1RL-211ENST00000545280 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
C1RL-211ENST00000545280 ABCC9O60706 1549 aa21.09■□□□□ 0.97
C1RL-211ENST00000545280 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
C1RL-211ENST00000545280 NACADO15069 1562 aa20.38■□□□□ 0.85
C1RL-211ENST00000545280 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
C1RL-211ENST00000545280 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
C1RL-211ENST00000545280 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
C1RL-211ENST00000545280 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
C1RL-211ENST00000545280 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
C1RL-211ENST00000545280 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
C1RL-211ENST00000545280 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
C1RL-211ENST00000545280 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
C1RL-211ENST00000545280 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
C1RL-211ENST00000545280 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
C1RL-211ENST00000545280 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
C1RL-211ENST00000545280 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
C1RL-211ENST00000545280 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
C1RL-211ENST00000545280 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
C1RL-211ENST00000545280 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
C1RL-211ENST00000545280 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
C1RL-211ENST00000545280 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
C1RL-211ENST00000545280 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
C1RL-211ENST00000545280 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
C1RL-211ENST00000545280 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
C1RL-211ENST00000545280 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
C1RL-211ENST00000545280 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.57
C1RL-211ENST00000545280 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
C1RL-211ENST00000545280 WIZO95785 1651 aa18.36■□□□□ 0.53
C1RL-211ENST00000545280 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
C1RL-211ENST00000545280 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
C1RL-211ENST00000545280 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
C1RL-211ENST00000545280 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
C1RL-211ENST00000545280 NESP48681 1621 aa18.2■□□□□ 0.5
C1RL-211ENST00000545280 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
C1RL-211ENST00000545280 CUX2O14529 1486 aa18.2■□□□□ 0.5
C1RL-211ENST00000545280 CFTRP13569 1480 aa18.09■□□□□ 0.49
C1RL-211ENST00000545280 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
C1RL-211ENST00000545280 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
C1RL-211ENST00000545280 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
C1RL-211ENST00000545280 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
C1RL-211ENST00000545280 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
C1RL-211ENST00000545280 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
C1RL-211ENST00000545280 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
C1RL-211ENST00000545280 WDR62O43379 1518 aa17.93■□□□□ 0.46
C1RL-211ENST00000545280 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
C1RL-211ENST00000545280 DNAJC5Q9H3Z4 198 aa17.78■□□□□ 0.44
C1RL-211ENST00000545280 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
C1RL-211ENST00000545280 SUPT5HO00267 1087 aaKnown RBP17.73■□□□□ 0.43
C1RL-211ENST00000545280 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
C1RL-211ENST00000545280 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
C1RL-211ENST00000545280 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
C1RL-211ENST00000545280 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
C1RL-211ENST00000545280 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
C1RL-211ENST00000545280 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
C1RL-211ENST00000545280 CUX1P39880 1505 aa17.47■□□□□ 0.39
C1RL-211ENST00000545280 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
C1RL-211ENST00000545280 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
C1RL-211ENST00000545280 SOGA1O94964 1423 aa17.43■□□□□ 0.38
C1RL-211ENST00000545280 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
C1RL-211ENST00000545280 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
C1RL-211ENST00000545280 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
C1RL-211ENST00000545280 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
C1RL-211ENST00000545280 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
C1RL-211ENST00000545280 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
C1RL-211ENST00000545280 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
C1RL-211ENST00000545280 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
C1RL-211ENST00000545280 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
C1RL-211ENST00000545280 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
C1RL-211ENST00000545280 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
C1RL-211ENST00000545280 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
C1RL-211ENST00000545280 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
C1RL-211ENST00000545280 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
C1RL-211ENST00000545280 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
C1RL-211ENST00000545280 SYNJ2O15056 1496 aa17.19■□□□□ 0.34
C1RL-211ENST00000545280 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
C1RL-211ENST00000545280 CHD1O14646 1710 aa17.18■□□□□ 0.34
C1RL-211ENST00000545280 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
C1RL-211ENST00000545280 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
C1RL-211ENST00000545280 FBLN2P98095 1184 aa17.13■□□□□ 0.33
C1RL-211ENST00000545280 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
C1RL-211ENST00000545280 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
C1RL-211ENST00000545280 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
C1RL-211ENST00000545280 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
C1RL-211ENST00000545280 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
C1RL-211ENST00000545280 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
C1RL-211ENST00000545280 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
C1RL-211ENST00000545280 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
C1RL-211ENST00000545280 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
C1RL-211ENST00000545280 NUP160Q12769 1436 aa16.99■□□□□ 0.31
C1RL-211ENST00000545280 CUL7Q14999 1698 aa16.97■□□□□ 0.31
C1RL-211ENST00000545280 IGF1RP08069 1367 aa16.93■□□□□ 0.3
C1RL-211ENST00000545280 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
C1RL-211ENST00000545280 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
C1RL-211ENST00000545280 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
C1RL-211ENST00000545280 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
C1RL-211ENST00000545280 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
C1RL-211ENST00000545280 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
C1RL-211ENST00000545280 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
C1RL-211ENST00000545280 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms